RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 PDLIM1O00151 329 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 KCNK3O14649 394 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 PJA2O43164 708 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 TREHO43280 583 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 BUB1BO60566 1050 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 KRT37O76014 449 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 VIMP08670 466 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 ZNF865P0CJ78 1059 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 PCNAP12004 261 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 MAPK4P31152 587 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 RAP1GAPP47736 663 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 CCT8P50990 548 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 ATP1A2P50993 1020 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 GPC3P51654 580 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 PTENP60484 403 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 VSNL1P62760 191 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 FMO1Q01740 532 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 CBX3Q13185 183 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 ZNF211Q13398 564 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 MXD4Q14582 209 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 GLRA4Q5JXX5 417 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 C17orf99Q6UX52 265 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 RUFY4Q6ZNE9 571 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 C15orf39Q6ZRI6 1047 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 FAM71AQ8IYT1 594 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 SIX5Q8N196 739 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 PAF1Q8N7H5 531 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 DNAJB3Q8WWF6 145 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 SHC3Q92529 594 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 SGCDQ92629 289 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 ZMAT2Q96NC0 199 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 OSBPL7Q9BZF2 842 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 YIPF3Q9GZM5 350 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 CDT1Q9H211 546 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 VTA1Q9NP79 307 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 TUBA8Q9NY65 449 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 DMGDHQ9UI17 866 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 NOCTQ9UK39 431 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 PAIP2BQ9ULR5 123 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 COQ4Q9Y3A0 265 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 C2CD2Q9Y426 696 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 LOC285556D6RIA3 1793 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 EYSQ5T1H1 3165 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 SZT2Q5T011 3432 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 ESYT3A0FGR9 886 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 H0YGN5 161 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 ACKR2O00590 384 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 NFICP08651 508 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 PDGFRBP09619 1106 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 C6orf222P0C671 652 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 ELNP15502 786 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 MAN1A1P33908 653 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 SKIV2L2P42285 1042 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 MARCKSL1P49006 195 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 NOP14P78316 857 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 MRPL28Q13084 256 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 PSMD6Q15008 389 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 MTFR1Q15390 333 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 SEPT7Q16181 437 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 DGKDQ16760 1214 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 FAM182AQ5T1J6 154 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 ZBTB8OSQ8IWT0 167 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 RAVER1Q8IY67 606 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 CCDC89Q8N998 374 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 CYFIP2Q96F07 1278 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 FAM167AQ96KS9 214 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 LRRC1Q9BTT6 524 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 APOL6Q9BWW8 343 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 AP1M1Q9BXS5 423 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 FZD8Q9H461 694 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 PAPOLBQ9NRJ5 636 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 RBM12Q9NTZ6 932 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 CLIC5Q9NZA1 410 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 CACNG4Q9UBN1 327 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 ADAM21Q9UKJ8 722 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 GJD2Q9UKL4 321 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 GNEQ9Y223 722 aaKnown RBP6.48□□□□□ -1.37
SSBP1-213ENST00000496622 NR2E1Q9Y466 385 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 EVPLQ92817 2033 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 A0A0G2JMZ2 1700 aa6.48□□□□□ -1.37
SSBP1-213ENST00000496622 SASH3O75995 380 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 PAHP00439 452 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 MYL3P08590 195 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 H2AFXP16104 143 aaPredicted RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 AKAP5P24588 427 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 IGFBP6P24592 240 aaPredicted RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 HOXD12P35452 270 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 PSMC4P43686 418 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 CENPAP49450 140 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 MFAP3P55082 362 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 OXCT1P55809 520 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 SNX16P57768 344 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 CUL3Q13618 768 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 TLDC1Q6P9B6 456 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 CXCL17Q6UXB2 119 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 CCDC121Q6ZUS5 278 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 VPS36Q86VN1 386 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 ABRAQ8N0Z2 381 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 MAB21L3Q8N8X9 362 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 LRRC57Q8N9N7 239 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms