RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 C4orf17Q53FE4 359 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 HES3Q5TGS1 186 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 RNF20Q5VTR2 975 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 ERICH1Q86X53 443 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 OR10T2Q8NGX3 314 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 DNASE2BQ8WZ79 361 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 NAF1Q96HR8 494 aaKnown RBP10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 NAP1L4Q99733 375 aaKnown RBP10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 HSD17B14Q9BPX1 270 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 TCHPQ9BT92 498 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 RWDD1Q9H446 243 aaPredicted RBP10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 GMIPQ9P107 970 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 NFE2L3Q9Y4A8 694 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 TRIP11Q15643 1979 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 NBPF19A0A087WUL8 3843 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 DOPEY2Q9Y3R5 2298 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 hCG_2014768A0A024R1R8 64 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 TBC1D3BA6NDS4 549 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 K7ERI5 159 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 TPD52L2O43399 206 aaKnown RBP10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 RFPL3O75679 317 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 ADH1CP00326 375 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 MCF2P10911 925 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 NCAM1P13591 858 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 KRT10P13645 584 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 CD6P30203 668 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 CCT8P50990 548 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 PDE6CP51160 858 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 MMP16P51512 607 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 CLDN6P56747 220 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 PCBP4P57723 403 aaKnown RBP10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 EXOSC10Q01780 885 aaKnown RBP10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 SERINC3Q13530 473 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 SDE2Q6IQ49 451 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 ATG14Q6ZNE5 492 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 LIAT1Q6ZQX7 453 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 RETREG3Q86VR2 466 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 FSIP1Q8NA03 581 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 SLC22A12Q96S37 553 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 CYP2S1Q96SQ9 504 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 MRPL4Q9BYD3 311 aaKnown RBP10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 ZCWPW1Q9H0M4 648 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 EGFL7Q9UHF1 273 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 ARHGAP26Q9UNA1 814 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 SRPK3Q9UPE1 567 aa10.34□□□□□ -0.75
SMARCAL1-213ENST00000496037 PHLPP2Q6ZVD8 1323 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 A0A087WWV3 80 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 BTBD18B2RXH4 712 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 M0R2N6 131 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 TERTO14746 1132 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 XPOTO43592 962 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 TADA3O75528 432 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 XRCC6P12956 609 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 LRPAP1P30533 357 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 NTSR1P30989 418 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 WASP42768 502 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 MESP2Q0VG99 397 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 DHCR24Q15392 516 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 GALNT17Q6IS24 598 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 KIAA1324Q6UXG2 1013 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 FILIP1Q7Z7B0 1213 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 C12orf40Q86WS4 652 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 TRIM22Q8IYM9 498 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 ARL14EPQ8N8R7 260 aaPredicted RBP10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 STKLD1Q8NE28 680 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 IPO4Q8TEX9 1081 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 MTMR9Q96QG7 549 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 ACO2Q99798 780 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 LSG1Q9H089 658 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 SEPT3Q9UH03 358 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 UBQLN1Q9UMX0 589 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 PCDHGC3Q9UN70 934 aa10.33□□□□□ -0.76
SMARCAL1-213ENST00000496037 ANK1P16157 1881 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 A0A0A0MRY4 1105 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 A0A1B0GVT2 93 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 ARHGEF35A5YM69 484 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 SLC9A3R1O14745 358 aaPredicted RBP10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 PCDHGA12O60330 932 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 DXOO77932 396 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 ADH5P11766 374 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 HDCP19113 662 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 TNFSF9P41273 254 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 CCR10P46092 362 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 AFF3P51826 1226 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 BNC1Q01954 994 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 UBAP2LQ14157 1087 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 NECTIN1Q15223 517 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 TEAD4Q15561 434 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 ZC2HC1CQ53FD0 456 aaPredicted RBP10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 C10orf76Q5T2E6 689 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 DCAF12L1Q5VU92 463 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 MPZL3Q6UWV2 235 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 USP49Q70CQ1 688 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 METTL23Q86XA0 190 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 CHPFQ8IZ52 775 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 THEM5Q8N1Q8 247 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 CADM4Q8NFZ8 388 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 ERLEC1Q96DZ1 483 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 SENP8Q96LD8 212 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 GPR174Q9BXC1 333 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms