RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 PRR23BQ6ZRT6 265 aa10.34□□□□□ -0.75
UFD1-210ENST00000494054 FILIP1Q7Z7B0 1213 aa10.34□□□□□ -0.75
UFD1-210ENST00000494054 SEMA4DQ92854 862 aa10.34□□□□□ -0.75
UFD1-210ENST00000494054 WBP2Q969T9 261 aa10.34□□□□□ -0.75
UFD1-210ENST00000494054 ZFRQ96KR1 1074 aaKnown RBP10.34□□□□□ -0.75
UFD1-210ENST00000494054 CCSER2Q9H7U1 834 aa10.34□□□□□ -0.75
UFD1-210ENST00000494054 TMEM8AQ9HCN3 771 aa10.34□□□□□ -0.75
UFD1-210ENST00000494054 CSNK1G1Q9HCP0 422 aa10.34□□□□□ -0.75
UFD1-210ENST00000494054 PARD6AQ9NPB6 346 aa10.34□□□□□ -0.75
UFD1-210ENST00000494054 GMIPQ9P107 970 aa10.34□□□□□ -0.75
UFD1-210ENST00000494054 CFAP97Q9P2B7 532 aa10.34□□□□□ -0.75
UFD1-210ENST00000494054 HELZP42694 1942 aaKnown RBP10.33□□□□□ -0.76
UFD1-210ENST00000494054 GOLGA6L4A6NEF3 574 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 HHLA1C9JL84 531 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 CILPO75339 1184 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 NFATC1O95644 943 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 CD58P19256 250 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 ADORA2BP29275 332 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 GTF2H1P32780 548 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 SLC6A11P48066 632 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 PMS1P54277 932 aaKnown RBP10.33□□□□□ -0.76
UFD1-210ENST00000494054 MESP2Q0VG99 397 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 NR1H3Q13133 447 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 SIM2Q14190 667 aaPredicted RBP10.33□□□□□ -0.76
UFD1-210ENST00000494054 DHCR24Q15392 516 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 HECTD3Q5T447 861 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 ZNF658Q5TYW1 1059 aaPredicted RBP10.33□□□□□ -0.76
UFD1-210ENST00000494054 SNX30Q5VWJ9 437 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 KRT39Q6A163 491 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 ANKRD40Q6AI12 368 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 RHBDF2Q6PJF5 856 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 CLEC20AQ6ZU45 233 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 GPRIN1Q7Z2K8 1008 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 WDR5BQ86VZ2 330 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 PDZD8Q8NEN9 1154 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 SPATA20Q8TB22 786 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 OVCA2Q8WZ82 227 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 JAKMIP2Q96AA8 810 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 CYFIP2Q96F07 1278 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 HNRNPABQ99729 332 aaKnown RBP10.33□□□□□ -0.76
UFD1-210ENST00000494054 NT5C1AQ9BXI3 368 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 NIF3L1Q9GZT8 377 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 CYP3A43Q9HB55 503 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 COMMD8Q9NX08 183 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 PCDHA5Q9Y5H7 936 aa10.33□□□□□ -0.76
UFD1-210ENST00000494054 TRIM49BA6NDI0 452 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 K7EQS6 105 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 CETN3O15182 167 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 ATG13O75143 517 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 TBX18O95935 607 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 CNR2P34972 360 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 SPEM2Q0P670 501 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 FBXO43Q4G163 708 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 COBLL1Q53SF7 1204 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 LAIR1Q6GTX8 287 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 ISM2Q6H9L7 571 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 SFTPA1Q8IWL2 248 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 ZC3H3Q8IXZ2 948 aaKnown RBP10.32□□□□□ -0.76
UFD1-210ENST00000494054 KIAA1958Q8N8K9 716 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 RPLP0P6Q8NHW5 317 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 TATDN2Q93075 761 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 CCDC34Q96HJ3 373 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 GSDMAQ96QA5 445 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 IMPG2Q9BZV3 1241 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 RMND1Q9NWS8 449 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 OSER1Q9NX31 292 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 GMEB2Q9UKD1 530 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 SLC8A2Q9UPR5 921 aa10.32□□□□□ -0.76
UFD1-210ENST00000494054 E2F8A0AVK6 867 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 SLC9A3R1O14745 358 aaPredicted RBP10.31□□□□□ -0.76
UFD1-210ENST00000494054 CYP26A1O43174 497 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 TLR5O60602 858 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 SMC2O95347 1197 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 RETP07949 1114 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 FAM200BP0CF97 657 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 EPB41P11171 864 aaKnown RBP10.31□□□□□ -0.76
UFD1-210ENST00000494054 CD44P16070 742 aaKnown RBP10.31□□□□□ -0.76
UFD1-210ENST00000494054 MXI1P50539 228 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 RSPO4Q2I0M5 234 aaPredicted RBP10.31□□□□□ -0.76
UFD1-210ENST00000494054 CBWD6Q4V339 395 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 ZNF394Q53GI3 561 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 CBWD3Q5JTY5 395 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 CBWD5Q5RIA9 395 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 PPP1R26Q5T8A7 1209 aaPredicted RBP10.31□□□□□ -0.76
UFD1-210ENST00000494054 CEP68Q76N32 757 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 SYT13Q7L8C5 426 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 C12orf40Q86WS4 652 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 BBS7Q8IWZ6 715 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 FAM160A2Q8N612 972 aaPredicted RBP10.31□□□□□ -0.76
UFD1-210ENST00000494054 FBXL13Q8NEE6 735 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 USP33Q8TEY7 942 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 SECISBP2LQ93073 1101 aaKnown RBP10.31□□□□□ -0.76
UFD1-210ENST00000494054 SMARCE1Q969G3 411 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 EXOC4Q96A65 974 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 TIGD1Q96MW7 591 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 HHIPQ96QV1 700 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 ARID3AQ99856 593 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 NMUR1Q9HB89 426 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 RAB20Q9NX57 234 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 DLL3Q9NYJ7 618 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms