RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 TRIM39Q9HCM9 518 aa5.2□□□□□ -1.58
CSTF1-205ENST00000490539 JADE2Q9NQC1 790 aa5.2□□□□□ -1.58
CSTF1-205ENST00000490539 KCNH7Q9NS40 1196 aa5.2□□□□□ -1.58
CSTF1-205ENST00000490539 DDX19AQ9NUU7 478 aaKnown RBP5.2□□□□□ -1.58
CSTF1-205ENST00000490539 VPS54Q9P1Q0 977 aa5.2□□□□□ -1.58
CSTF1-205ENST00000490539 COL20A1Q9P218 1284 aa5.2□□□□□ -1.58
CSTF1-205ENST00000490539 TPCN1Q9ULQ1 816 aa5.2□□□□□ -1.58
CSTF1-205ENST00000490539 FAM208BQ5VWN6 2430 aa5.2□□□□□ -1.58
CSTF1-205ENST00000490539 MCM3APO60318 1980 aa5.2□□□□□ -1.58
CSTF1-205ENST00000490539 ASTN1O14525 1302 aa5.2□□□□□ -1.58
CSTF1-205ENST00000490539 FRMPD4Q14CM0 1322 aa5.2□□□□□ -1.58
CSTF1-205ENST00000490539 DNAH12Q6ZR08 3092 aa5.2□□□□□ -1.58
CSTF1-205ENST00000490539 NCOR2Q9Y618 2525 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 XIRP2A4UGR9 3374 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 VPS37CA5D8V6 355 aaPredicted RBP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 IPO5O00410 1097 aaKnown RBP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 AP5Z1O43299 807 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 CTIFO43310 598 aaKnown RBP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 DKC1O60832 514 aaKnown RBP eCLIP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 RFPL3O75679 317 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 PARNO95453 639 aaKnown RBP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 CAVIN2O95810 425 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 MMP3P08254 477 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 UBA1P22314 1058 aaKnown RBP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 PTGS1P23219 599 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 CNR2P34972 360 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 SLC26A2P50443 739 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 PURAQ00577 322 aaKnown RBP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 SQSTM1Q13501 440 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 PTGISQ16647 500 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 LRRC26Q2I0M4 334 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 SLC35G1Q2M3R5 365 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 ZNF568Q3ZCX4 644 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 TRIM60Q495X7 471 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 PRR16Q569H4 304 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 ZCCHC8Q6NZY4 707 aaKnown RBP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 MIS18BP1Q6P0N0 1132 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 CCDC62Q6P9F0 684 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 OVCH1Q7RTY7 1134 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 ANKRD33Q7Z3H0 272 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 FGD2Q7Z6J4 655 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 RSPH3Q86UC2 560 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 FERMT3Q86UX7 667 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 PLA2G4DQ86XP0 818 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 RPUSD2Q8IZ73 545 aaKnown RBP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 STPG3Q8N7X2 389 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 NECAB1Q8N987 351 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 ATXN2LQ8WWM7 1075 aaKnown RBP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 SEPT1Q8WYJ6 367 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 ANKRD7Q92527 254 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 C8orf76Q96K31 380 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 ASB2Q96Q27 587 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 ZNF577Q9BSK1 485 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 BOCQ9BWV1 1114 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 CLSTN2Q9H4D0 955 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 SMARCAD1Q9H4L7 1026 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 SMURF1Q9HCE7 757 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 SLC39A2Q9NP94 309 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 ERAP1Q9NZ08 941 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 SAMD15Q9P1V8 674 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 MAGEC2Q9UBF1 373 aaPredicted RBP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 SLC9A2Q9UBY0 812 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 PRDM4Q9UKN5 801 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 ZMYND8Q9ULU4 1186 aaPredicted RBP5.19□□□□□ -1.58
CSTF1-205ENST00000490539 PYCARDQ9ULZ3 195 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 NFASCO94856 1347 aa5.19□□□□□ -1.58
CSTF1-205ENST00000490539 ESYT3A0FGR9 886 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 ANKRD62A6NC57 917 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 RRN3P2A6NIE6 340 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 M0QZ92 97 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 KCNK3O14649 394 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 CCNT1O60563 726 aaKnown RBP5.18□□□□□ -1.58
CSTF1-205ENST00000490539 GAS7O60861 476 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 CUTAO60888 179 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 PFKMP08237 780 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 CYP3A4P08684 503 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 ACTN1P12814 892 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 SFNP31947 248 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 TCF7P36402 384 aaPredicted RBP5.18□□□□□ -1.58
CSTF1-205ENST00000490539 MRPS9P82933 396 aaKnown RBP5.18□□□□□ -1.58
CSTF1-205ENST00000490539 FPGSQ05932 587 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 ARHGAP1Q07960 439 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 NFATC3Q12968 1075 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 PPIGQ13427 754 aaKnown RBP eCLIP5.18□□□□□ -1.58
CSTF1-205ENST00000490539 KIAA0753Q2KHM9 967 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 LETM2Q2VYF4 491 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 WDR72Q3MJ13 1102 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 CCSAPQ6IQ19 270 aaPredicted RBP5.18□□□□□ -1.58
CSTF1-205ENST00000490539 MOXD1Q6UVY6 613 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 ARHGEF18Q6ZSZ5 1173 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 CXXC5Q7LFL8 322 aaKnown RBP5.18□□□□□ -1.58
CSTF1-205ENST00000490539 NEK8Q86SG6 692 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 NOP9Q86U38 636 aaKnown RBP5.18□□□□□ -1.58
CSTF1-205ENST00000490539 LURAP1LQ8IV03 231 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 EXOC8Q8IYI6 725 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 HIPK4Q8NE63 616 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 IL31RAQ8NI17 732 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 CAGE1Q8TC20 777 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 CALML6Q8TD86 181 aa5.18□□□□□ -1.58
CSTF1-205ENST00000490539 TBCKQ8TEA7 893 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms