RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 DDX53Q86TM3 631 aaKnown RBP10.5□□□□□ -0.73
USP11-211ENST00000489111 CCDC50Q8IVM0 306 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 KATNAL2Q8IYT4 538 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 RNF168Q8IYW5 571 aaPredicted RBP10.5□□□□□ -0.73
USP11-211ENST00000489111 FBXO22Q8NEZ5 403 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 SPPL2BQ8TCT7 592 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 ACTRT1Q8TDG2 376 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 IRGQQ8WZA9 623 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 MS4A14Q96JA4 679 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 C8orf48Q96LL4 319 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 SEPT5Q99719 369 aaPredicted RBP10.5□□□□□ -0.73
USP11-211ENST00000489111 VN1R3Q9BXE9 311 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 NGRNQ9NPE2 291 aaKnown RBP10.5□□□□□ -0.73
USP11-211ENST00000489111 CHST7Q9NS84 486 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 TMEM30AQ9NV96 361 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 DDX56Q9NY93 547 aaKnown RBP10.5□□□□□ -0.73
USP11-211ENST00000489111 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP11-211ENST00000489111 SMARCAL1Q9NZC9 954 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 STAP1Q9ULZ2 295 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 COL4A6Q14031 1691 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 TSC2P49815 1807 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 GOLGA6L10A0A0M3HER8 536 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 MTMR11A4FU01 709 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 EFCAB8A8MWE9 144 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 HHLA1C9JL84 531 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 PDE2AO00408 941 aaPredicted RBP10.49□□□□□ -0.73
USP11-211ENST00000489111 CAPN9O14815 690 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 PRPSAP2O60256 369 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 TBC1D4O60343 1298 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 LRCH4O75427 683 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 FGF18O76093 207 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 EFEMP2O95967 443 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 USP17L7P0C7H9 530 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 CA8P35219 290 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 CTNNB1P35222 781 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 PCK1P35558 622 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 NDUFV1P49821 464 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 PEX5P50542 639 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 DAOAP59103 153 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 TAS2R40P59535 323 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 RPL10AP62906 217 aaKnown RBP10.49□□□□□ -0.73
USP11-211ENST00000489111 YWHAZP63104 245 aaKnown RBP10.49□□□□□ -0.73
USP11-211ENST00000489111 ATP11AP98196 1134 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 ROR1Q01973 937 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 IFRD2Q12894 506 aaPredicted RBP10.49□□□□□ -0.73
USP11-211ENST00000489111 CDO1Q16878 200 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 LONRF2Q1L5Z9 754 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 MGAT5BQ3V5L5 792 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 DCAF12L1Q5VU92 463 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 SLC8B1Q6J4K2 584 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 CCDC70Q6NSX1 233 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 ZNF572Q7Z3I7 529 aaPredicted RBP10.49□□□□□ -0.73
USP11-211ENST00000489111 POLNQ7Z5Q5 900 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 VPS52Q8N1B4 723 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 RASGEF1CQ8N431 466 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 ATAD1Q8NBU5 361 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 FAM172AQ8WUF8 416 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 UBXN4Q92575 508 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 RBM41Q96IZ5 413 aaKnown RBP10.49□□□□□ -0.73
USP11-211ENST00000489111 CFAP57Q96MR6 1250 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 ZWILCHQ9H900 591 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 POPDC2Q9HBU9 364 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 MRPL17Q9NRX2 175 aaKnown RBP10.49□□□□□ -0.73
USP11-211ENST00000489111 EHD2Q9NZN4 543 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 RWDD3Q9Y3V2 267 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 TET1Q8NFU7 2136 aa10.49□□□□□ -0.73
USP11-211ENST00000489111 TDRD15B5MCY1 1934 aaKnown RBP10.48□□□□□ -0.73
USP11-211ENST00000489111 TRIP11Q15643 1979 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 MICAL3Q7RTP6 2002 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 KRIT1O00522 736 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 ZRANB2O95218 330 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP11-211ENST00000489111 FGGP02679 453 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 LTFP02788 710 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 PYGMP11217 842 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 RPL17P18621 184 aaKnown RBP10.48□□□□□ -0.73
USP11-211ENST00000489111 DNAJB2P25686 324 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 MIPP30301 263 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 OR1D2P34982 312 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 GTF2F1P35269 517 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP11-211ENST00000489111 MATKP42679 507 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 SULT1E1P49888 294 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 ITIH3Q06033 890 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 C2orf54Q08AI8 447 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 C15orf59Q2T9L4 293 aaPredicted RBP10.48□□□□□ -0.73
USP11-211ENST00000489111 CCDC14Q49A88 953 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 DCAF6Q58WW2 860 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 TRNP1Q6NT89 227 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 RSPO2Q6UXX9 243 aaPredicted RBP10.48□□□□□ -0.73
USP11-211ENST00000489111 RNF19BQ6ZMZ0 732 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 DEFB106AQ8N104 65 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 SCML4Q8N228 414 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 LRRN4CLQ8ND94 238 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 SPATA4Q8NEY3 305 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 EXD1Q8NHP7 514 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 SP7Q8TDD2 431 aaPredicted RBP10.48□□□□□ -0.73
USP11-211ENST00000489111 NDRG1Q92597 394 aaKnown RBP10.48□□□□□ -0.73
USP11-211ENST00000489111 CLP1Q92989 425 aaKnown RBP10.48□□□□□ -0.73
USP11-211ENST00000489111 SLC2A13Q96QE2 648 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 DDX23Q9BUQ8 820 aaKnown RBP10.48□□□□□ -0.73
USP11-211ENST00000489111 FBXO44Q9H4M3 255 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms