RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 SPATA4Q8NEY3 305 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 RIN2Q8WYP3 895 aaPredicted RBP11.45□□□□□ -0.58
COL21A1-211ENST00000488912 TMEM169Q96HH4 297 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 CNPY3Q9BT09 278 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 HTATIP2Q9BUP3 242 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 UBXN6Q9BZV1 441 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 RAB6CQ9H0N0 254 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 ZNF638Q14966 1978 aaKnown RBP11.45□□□□□ -0.58
COL21A1-211ENST00000488912 GREB1Q4ZG55 1949 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 H7C4K7 107 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 CLGNO14967 610 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 FGGP02679 453 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 USP17L7P0C7H9 530 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 GRIK1P39086 918 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 ATP11AP98196 1134 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 CDO1Q16878 200 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 ERCC6LQ2NKX8 1250 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 CCDC14Q49A88 953 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 TEX35Q5T0J7 233 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 ATAD1Q8NBU5 361 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 GOLGA1Q92805 767 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 FAM149B1Q96BN6 582 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 FUBP3Q96I24 572 aaKnown RBP eCLIP11.44□□□□□ -0.58
COL21A1-211ENST00000488912 CHST7Q9NS84 486 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 KLHL11Q9NVR0 708 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.44□□□□□ -0.58
COL21A1-211ENST00000488912 CDY1Q9Y6F8 540 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 PLXNA4Q9HCM2 1894 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 C2CD2LO14523 706 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 DPYSL4O14531 572 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 ADAM12O43184 909 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 HSF2BPO75031 334 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 SOD2P04179 222 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 LINC00271P0C7V0 271 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 RPL17P18621 184 aaKnown RBP11.44□□□□□ -0.58
COL21A1-211ENST00000488912 TFE3P19532 575 aaPredicted RBP11.44□□□□□ -0.58
COL21A1-211ENST00000488912 SDC4P31431 198 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 DAOAP59103 153 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 SLC25A11Q02978 314 aaKnown RBP11.44□□□□□ -0.58
COL21A1-211ENST00000488912 GPR17Q13304 367 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 PSMD5Q16401 504 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 ATP13A4Q4VNC1 1196 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 EFHC1Q5JVL4 640 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 HFE2Q6ZVN8 426 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 ARCQ7LC44 396 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 PIK3R5Q8WYR1 880 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 HERVK_113Q902F9 699 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 ACSF2Q96CM8 615 aaPredicted RBP11.44□□□□□ -0.58
COL21A1-211ENST00000488912 RPGRIP1Q96KN7 1286 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 ZBED2Q9BTP6 218 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 ADAM33Q9BZ11 813 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 PNPLA8Q9NP80 782 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 CNGB3Q9NQW8 809 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 RBM12Q9NTZ6 932 aaKnown RBP11.44□□□□□ -0.58
COL21A1-211ENST00000488912 ASNSD1Q9NWL6 643 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 ZNF446Q9NWS9 450 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 SPG21Q9NZD8 308 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 MTRRQ9UBK8 725 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 TTC7AQ9ULT0 858 aaPredicted RBP11.44□□□□□ -0.58
COL21A1-211ENST00000488912 PCDHB5Q9Y5E4 795 aa11.44□□□□□ -0.58
COL21A1-211ENST00000488912 MTMR11A4FU01 709 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 YJEFN3A6XGL0 299 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 E7ENQ6 273 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 RNF8O76064 485 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 FBXO21O94952 628 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 VNN2O95498 520 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 ZBED1O96006 694 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 IL1R2P27930 398 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 MIPP30301 263 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 GPR15P49685 360 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 HNRNPH2P55795 449 aaKnown RBP11.43□□□□□ -0.58
COL21A1-211ENST00000488912 YWHAZP63104 245 aaKnown RBP11.43□□□□□ -0.58
COL21A1-211ENST00000488912 ACAP1Q15027 740 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 ELF2Q15723 593 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 SEL1L2Q5TEA6 688 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 LRRC38Q5VT99 294 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 KIAA1841Q6NSI8 718 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 RNF19BQ6ZMZ0 732 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 BHLHA9Q7RTU4 235 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 HERC6Q8IVU3 1022 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 SCN4BQ8IWT1 228 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 KATNAL2Q8IYT4 538 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 STKLD1Q8NE28 680 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 FBXO22Q8NEZ5 403 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 SCAMP5Q8TAC9 235 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 UBXN4Q92575 508 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 INSL6Q9Y581 213 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 SLC4A7Q9Y6M7 1214 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 CEP290O15078 2479 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 PLXNA3P51805 1871 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 TNFRSF10BO14763 440 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 DAB1O75553 588 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 SLC5A3P53794 718 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 ITIH3Q06033 890 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 LLGL1Q15334 1064 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 DDR2Q16832 855 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 SMTNL2Q2TAL5 461 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 SDHAF4Q5VUM1 108 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 SLC8B1Q6J4K2 584 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 VSTM1Q6UX27 236 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms