RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 IGFBP7Q16270 282 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 PADI6Q6TGC4 694 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 DHX32Q7L7V1 743 aaKnown RBP13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 NEK8Q86SG6 692 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 FAM124AQ86V42 546 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 SMC5Q8IY18 1101 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 DCP1BQ8IZD4 617 aaKnown RBP13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 TRMT2BQ96GJ1 504 aaKnown RBP13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 RNF26Q9BY78 433 aaPredicted RBP13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 MRPL4Q9BYD3 311 aaKnown RBP13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 TM9SF3Q9HD45 589 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 WDR70Q9NW82 654 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 PCDHA12Q9UN75 941 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 PCDHB6Q9Y5E3 794 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 CLEC18AA5D8T8 446 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 CCDC169A6NNP5 214 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 LAD1O00515 517 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 MT-CO3P00414 261 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 GCFC2P16383 781 aaKnown RBP13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 CYP11B2P19099 503 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 ABCB4P21439 1286 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 CYP2F1P24903 491 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 TPMTP51580 245 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 RCAN1P53805 252 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 GABREP78334 506 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 NECTIN1Q15223 517 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 MPZL3Q6UWV2 235 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 CLEC18BQ6UXF7 455 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 ADAT2Q7Z6V5 191 aaKnown RBP13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 FAM26EQ8N5C1 309 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 DCBLD1Q8N8Z6 715 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 TERB1Q8NA31 727 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 CLEC18CQ8NCF0 446 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 VCPIP1Q96JH7 1222 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 MYRFLQ96LU7 910 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 GABRG3Q99928 467 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 RNF38Q9H0F5 515 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 USP36Q9P275 1121 aaKnown RBP13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 CFAP97Q9P2B7 532 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 UBQLN1Q9UMX0 589 aaKnown RBP13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 STARD13Q9Y3M8 1113 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 CPQQ9Y646 472 aa13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 USP9YO00507 2555 aaPredicted RBP13.08□□□□□ -0.32
ATPAF1-205ENST00000487193 C2CD3Q4AC94 2353 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 CYB561D2O14569 222 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 ABLIM1O14639 778 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 CYP11A1P05108 521 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 CYP3A5P20815 502 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 OXTRP30559 389 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 GRIK1P39086 918 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 CTSKP43235 329 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 RPL10AP62906 217 aaKnown RBP13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 ZBTB6Q15916 424 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 NTRK3Q16288 839 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 ANO4Q32M45 955 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 ZSCAN23Q3MJ62 389 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 TTC22Q5TAA0 569 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 ETFBKMTQ8IXQ9 262 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 LSMEM2Q8N112 164 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 CACTIN-AS1Q8N1I8 211 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 EXTL1Q92935 676 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 NUP58Q9BVL2 599 aa13.07□□□□□ -0.32
ATPAF1-205ENST00000487193 LRRK2Q5S007 2527 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 A0A1B0GTQ1 180 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 ARHGEF35A5YM69 484 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 PAPSS1O43252 624 aaPredicted RBP13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 ABL1P00519 1130 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 FAM87AP0C7U9 286 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 PROZP22891 400 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 GRIA4P48058 902 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 PDE6CP51160 858 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 ERVPABLB-1P60509 514 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 NPY5RQ15761 445 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 FUT11Q495W5 492 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 WSCD1Q658N2 575 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 METTL3Q86U44 580 aaKnown RBP13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 CACUL1Q86Y37 369 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 SCFD1Q8WVM8 642 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 PYM1Q9BRP8 204 aaKnown RBP13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 MKRN2Q9H000 416 aaKnown RBP13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 C6orf106Q9H6K1 298 aaPredicted RBP13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 PLEKHB1Q9UF11 243 aaPredicted RBP13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 DSEQ9UL01 958 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 SSUH2Q9Y2M2 353 aa13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 TP53BP1Q12888 1972 aaPredicted RBP13.06□□□□□ -0.32
ATPAF1-205ENST00000487193 TCHHQ07283 1943 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 LACTBL1A8MY62 500 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 TRAK2O60296 914 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 DFNA5O60443 496 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 USP12O75317 370 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 SPATA31C1P0DKV0 1188 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 TXKP42681 527 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 MATR3P43243 847 aaKnown RBP eCLIP13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 PEX3P56589 373 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 C21orf59P57076 290 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 ARL13BQ3SXY8 428 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 GRAMD4Q6IC98 578 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 TAS1R3Q7RTX0 852 aa13.05□□□□□ -0.32
ATPAF1-205ENST00000487193 SCN4BQ8IWT1 228 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms