RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 MTMR3Q13615 1198 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 PTPN20Q4JDL3 420 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 ALKBH5Q6P6C2 394 aaKnown RBP13.47□□□□□ -0.25
HDAC6-229ENST00000486665 SYCE2Q6PIF2 218 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 PHLDB2Q86SQ0 1253 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 VPS36Q86VN1 386 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 CCDC112Q8NEF3 446 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 SLC7A14Q8TBB6 771 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 FEZF2Q8TBJ5 459 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 STK32AQ8WU08 396 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 ASIC4Q96FT7 647 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 PPP1R13BQ96KQ4 1090 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 CPXM1Q96SM3 734 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 ISCUQ9H1K1 167 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 MAN1C1Q9NR34 630 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 REXO2Q9Y3B8 237 aaKnown RBP13.47□□□□□ -0.25
HDAC6-229ENST00000486665 YIPF1Q9Y548 306 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 CEP83Q9Y592 693 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 INSL5Q9Y5Q6 135 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 SLC38A8A6NNN8 435 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 EIF3CLB5ME19 914 aaKnown RBP13.46□□□□□ -0.25
HDAC6-229ENST00000486665 TRIM66O15016 1216 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 RTN2O75298 545 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 NDUFA10O95299 355 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 LCA5LO95447 670 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 PDGFBP01127 241 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-229ENST00000486665 ERBB2P04626 1255 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 C8AP07357 584 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 LCP1P13796 627 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 MMP8P22894 467 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 CYLC1P35663 651 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-229ENST00000486665 ALDH1A3P47895 512 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 SLC8A3P57103 927 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 USP46P62068 366 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 RPL10AP62906 217 aaKnown RBP13.46□□□□□ -0.25
HDAC6-229ENST00000486665 RAB41Q5JT25 222 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 MMS22LQ6ZRQ5 1243 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 TOGARAM2Q6ZUX3 1019 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 TMEM110Q86TL2 294 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 ERICH1Q86X53 443 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 PHF13Q86YI8 300 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-229ENST00000486665 ACRBPQ8NEB7 543 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 SCAMP5Q8TAC9 235 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 KCTD13Q8WZ19 329 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 NDRG1Q92597 394 aaKnown RBP13.46□□□□□ -0.25
HDAC6-229ENST00000486665 SPATA17Q96L03 361 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 HSFY1Q96LI6 401 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 EIF3CQ99613 913 aaKnown RBP13.46□□□□□ -0.25
HDAC6-229ENST00000486665 CDCA3Q99618 268 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-229ENST00000486665 PLEKHA4Q9H4M7 779 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 ST7Q9NRC1 585 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 CFAP54Q96N23 3096 aa13.46□□□□□ -0.25
HDAC6-229ENST00000486665 PLXNA3P51805 1871 aa13.46□□□□□ -0.26
HDAC6-229ENST00000486665 MYO10Q9HD67 2058 aa13.46□□□□□ -0.26
HDAC6-229ENST00000486665 CACNA1HO95180 2353 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 E5RJQ4 531 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 RFPL2O75678 378 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 ZMYND10O75800 440 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 MAGEA1P43355 309 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 NSFP46459 744 aaKnown RBP13.45□□□□□ -0.26
HDAC6-229ENST00000486665 GABRB2P47870 512 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 PPM1LQ5SGD2 360 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 CYP4A22Q5TCH4 519 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 LIN9Q5TKA1 542 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 ANKRD54Q6NXT1 300 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 TMEM184AQ6ZMB5 413 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 CCDC149Q6ZUS6 474 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 MON1BQ7L1V2 547 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 SCUBE3Q8IX30 993 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 MCOLN2Q8IZK6 566 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 NUP93Q8N1F7 819 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 C12orf76Q8N812 135 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-229ENST00000486665 CLEC4CQ8WTT0 213 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 HDAC7Q8WUI4 952 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 NOX5Q96PH1 765 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 C11orf70Q9BRQ4 267 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 DESI2Q9BSY9 194 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 PACSIN1Q9BY11 444 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 MIS12Q9H081 205 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 PNPLA8Q9NP80 782 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 FAM86C1Q9NVL1 165 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 IL37Q9NZH6 218 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 ADAM22Q9P0K1 906 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 TFR2Q9UP52 801 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 PCDHA13Q9Y5I0 950 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 PTPRDP23468 1912 aa13.45□□□□□ -0.26
HDAC6-229ENST00000486665 ZFHX2Q9C0A1 2572 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-229ENST00000486665 CCL16O15467 120 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 ARHGAP6O43182 974 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 PAPSS1O43252 624 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-229ENST00000486665 HMGA1P17096 107 aaKnown RBP13.44□□□□□ -0.26
HDAC6-229ENST00000486665 TKTL1P51854 596 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 SLC5A3P53794 718 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 EPHB3P54753 998 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 GALCP54803 685 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
HDAC6-229ENST00000486665 SIGLEC14Q08ET2 396 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 ADIGQ0VDE8 80 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 DENND5BQ6ZUT9 1274 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms