RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 RGS7P49802 495 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 AFF1P51825 1210 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 TAZQ16635 292 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 ZFYVE27Q5T4F4 411 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 DUPD1Q68J44 220 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 SPOCD1Q6ZMY3 1216 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 JAMLQ86YT9 394 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 MAP7D3Q8IWC1 876 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 CCDC105Q8IYK2 499 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 SCML4Q8N228 414 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 C3orf58Q8NDZ4 430 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 CMASQ8NFW8 434 aaPredicted RBP12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 ATL2Q8NHH9 583 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 CCHCR1Q8TD31 782 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 LRRC45Q96CN5 670 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 FAM193BQ96PV7 902 aaPredicted RBP12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 MED10Q9BTT4 135 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 DCLK3Q9C098 648 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 PRDM16Q9HAZ2 1276 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 TMEM51Q9NW97 253 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 PCDHB8Q9UN66 801 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 INPP5FQ9Y2H2 1132 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 PCDHB7Q9Y5E2 793 aa12.36□□□□□ -0.43
ERGIC3-215ENST00000486268 KIAA1671Q9BY89 1806 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 hCG_1818297A0A087WSY0 165 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 LRRD1A4D1F6 860 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 GRXCR1A8MXD5 290 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 PRPSAP2O60256 369 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 EFCAB14O75071 495 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 SASH3O75995 380 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 MIPP30301 263 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 CDKN2BP42772 138 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 TNNT3P45378 269 aaPredicted RBP12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 CARSP49589 748 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 TSPY1Q01534 308 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 PDK2Q15119 407 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 MDH1BQ5I0G3 518 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 CLLU1OSQ5K130 101 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 SPDYCQ5MJ68 293 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 ALS2CLQ60I27 953 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 FAM171BQ6P995 826 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 CD300LGQ6UXG3 332 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 CLEC20AQ6ZU45 233 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 ADAT2Q7Z6V5 191 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 PIGZQ86VD9 579 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 SCUBE3Q8IX30 993 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 ZDHHC14Q8IZN3 488 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 ARFGAP1Q8N6T3 406 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 EMC1Q8N766 993 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 BBOF1Q8ND07 529 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 IFT81Q8WYA0 676 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 CENPIQ92674 756 aaPredicted RBP12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 SMARCD1Q96GM5 515 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 DDX23Q9BUQ8 820 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 TRIM62Q9BVG3 475 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 MRPL9Q9BYD2 267 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 B3GNT5Q9BYG0 378 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 LRRC4Q9HBW1 653 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 PNPLA8Q9NP80 782 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 CRTAC1Q9NQ79 661 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 RRN3Q9NYV6 651 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 NFU1Q9UMS0 254 aa12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 DRG1Q9Y295 367 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-215ENST00000486268 TCRBV7S2A1N4TA0A589 114 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 C3orf70A6NLC5 250 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 TULP2O00295 520 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 SYN3O14994 580 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 MDM4O15151 490 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 HCRTO43612 131 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 DAB1O75553 588 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 ENDOD1O94919 500 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 KDELR1P24390 212 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 TKTP29401 623 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 GJC1P36383 396 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 FLT3P36888 993 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 MRPS5P82675 430 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 CAV1Q03135 178 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 MTMR3Q13615 1198 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 HLTFQ14527 1009 aaKnown RBP eCLIP12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 CCDC14Q49A88 953 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 INTS6LQ5JSJ4 861 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 OVOS1Q6IE37 1185 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 MFSD7Q6UXD7 560 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 C4orf50Q6ZRC1 276 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 PAQR9Q6ZVX9 377 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 SND1Q7KZF4 910 aaKnown RBP eCLIP12.34□□□□□ -0.435e-29■■■□□ 17
ERGIC3-215ENST00000486268 STRADAQ7RTN6 431 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 FAM35AQ86V20 835 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 PSTKQ8IV42 348 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 COLGALT2Q8IYK4 626 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 ABI1Q8IZP0 508 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 SIX6OS1Q8N1H7 587 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 KCTD6Q8NC69 237 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 IRGQQ8WZA9 623 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 KHSRPQ92945 711 aaKnown RBP eCLIP12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 TOP1MTQ969P6 601 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 RNF25Q96BH1 459 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 SLC9A7Q96T83 725 aa12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 C11orf84Q9BUA3 381 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-215ENST00000486268 OXCT2Q9BYC2 517 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms