RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 RTP4Q96DX8 246 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 PIWIL1Q96J94 861 aaKnown RBP12.51□□□□□ -0.41
PKP4-213ENST00000486254 SERPINB12Q96P63 405 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 DDX23Q9BUQ8 820 aaKnown RBP12.51□□□□□ -0.41
PKP4-213ENST00000486254 CDC42EP4Q9H3Q1 356 aaKnown RBP12.51□□□□□ -0.41
PKP4-213ENST00000486254 ZWILCHQ9H900 591 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 SLC12A6Q9UHW9 1150 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 TPX2Q9ULW0 747 aaKnown RBP12.51□□□□□ -0.41
PKP4-213ENST00000486254 ARL5CA6NH57 179 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 TULP2O00295 520 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 DAB1O75553 588 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 CCDC130P13994 396 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 ZFXP17010 805 aaPredicted RBP12.5□□□□□ -0.41
PKP4-213ENST00000486254 PTPN1P18031 435 aaKnown RBP12.5□□□□□ -0.41
PKP4-213ENST00000486254 LMO2P25791 158 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 PCSK1P29120 753 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 CCND3P30281 292 aaPredicted RBP12.5□□□□□ -0.41
PKP4-213ENST00000486254 MLH1P40692 756 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 RGS7P49802 495 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 AIF1P55008 147 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 PRMT2P55345 433 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 HDAC4P56524 1084 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 RASA2Q15283 850 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 SMTNL2Q2TAL5 461 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 RNASEH2BQ5TBB1 312 aaKnown RBP12.5□□□□□ -0.41
PKP4-213ENST00000486254 SLC9A4Q6AI14 798 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 CYP4F22Q6NT55 531 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 C4orf22Q6V702 233 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 OSTM1Q86WC4 334 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 SCML4Q8N228 414 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 RIBC1Q8N443 379 aaPredicted RBP12.5□□□□□ -0.41
PKP4-213ENST00000486254 SLC43A3Q8NBI5 491 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 SLC2A14Q8TDB8 520 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 FAM172AQ8WUF8 416 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 NT5C3BQ969T7 300 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 SENP8Q96LD8 212 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 ZFP42Q96MM3 310 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 RNF157Q96PX1 679 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 GAD1Q99259 594 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 ADAM7Q9H2U9 754 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 AGO3Q9H9G7 860 aaKnown RBP12.5□□□□□ -0.41
PKP4-213ENST00000486254 GOLGA2P5Q9HBQ8 144 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.5□□□□□ -0.41
PKP4-213ENST00000486254 DSEQ9UL01 958 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 CDH9Q9ULB4 789 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 PADI3Q9ULW8 664 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
PKP4-213ENST00000486254 FRMPD3Q5JV73 1810 aa12.5□□□□□ -0.41
PKP4-213ENST00000486254 TDRD15B5MCY1 1934 aaKnown RBP12.5□□□□□ -0.41
PKP4-213ENST00000486254 TSHRP16473 764 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 ATP5DP30049 168 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 THPOP40225 353 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 MATKP42679 507 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 CDH6P55285 790 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 TRIM32Q13049 653 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 ITGA7Q13683 1181 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 LPIN1Q14693 890 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 LLGL1Q15334 1064 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 UPP1Q16831 310 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 P3H1Q32P28 736 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 KCNT1Q5JUK3 1230 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 WSCD1Q658N2 575 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 PIGZQ86VD9 579 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 OR2W6PQ8NHA6 318 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 SLC9A7Q96T83 725 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 FRMD8Q9BZ67 464 aaPredicted RBP12.49□□□□□ -0.41
PKP4-213ENST00000486254 PCDH18Q9HCL0 1135 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 RNF186Q9NXI6 227 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 RRN3Q9NYV6 651 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.49□□□□□ -0.41
PKP4-213ENST00000486254 FETUBQ9UGM5 382 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 PCSK1NQ9UHG2 260 aa12.49□□□□□ -0.41
PKP4-213ENST00000486254 SF3B1O75533 1304 aaKnown RBP eCLIP12.49□□□□□ -0.41
PKP4-213ENST00000486254 C9IYK1 514 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 M0QZQ0 153 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 RASGRF2O14827 1237 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 PDGFRBP09619 1106 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 CTSHP09668 335 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 ODC1P11926 461 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 ADORA2BP29275 332 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 TKTP29401 623 aaKnown RBP12.48□□□□□ -0.41
PKP4-213ENST00000486254 MDH1P40925 334 aaKnown RBP12.48□□□□□ -0.41
PKP4-213ENST00000486254 NR2C2P49116 596 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 IRAK1P51617 712 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 ACLYP53396 1101 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 PPP2R2AP63151 447 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 XRCC4Q13426 336 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 STAT4Q14765 748 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 C15orf59Q2T9L4 293 aaPredicted RBP12.48□□□□□ -0.41
PKP4-213ENST00000486254 SLC25A52Q3SY17 297 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 KCTD16Q68DU8 428 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 ZNF598Q86UK7 904 aaKnown RBP12.48□□□□□ -0.41
PKP4-213ENST00000486254 RFX6Q8HWS3 928 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 SCUBE3Q8IX30 993 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 SH2D3CQ8N5H7 860 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 CENPTQ96BT3 561 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 CAPNS2Q96L46 248 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 CFAP57Q96MR6 1250 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 SLC2A13Q96QE2 648 aa12.48□□□□□ -0.41
PKP4-213ENST00000486254 SNRNP25Q9BV90 132 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms