RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 EFHC1Q5JVL4 640 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 RASIP1Q5U651 963 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 LRRC38Q5VT99 294 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 OTUD1Q5VV17 481 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-226ENST00000483656 PM20D1Q6GTS8 502 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 RNF19BQ6ZMZ0 732 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 CYP4V2Q6ZWL3 525 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-226ENST00000483656 ANKS1BQ7Z6G8 1248 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 HERC6Q8IVU3 1022 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 RHOT1Q8IXI2 618 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 KATNAL2Q8IYT4 538 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 DEFB106AQ8N104 65 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 SCML4Q8N228 414 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 TTC9BQ8N6N2 239 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 ATAD1Q8NBU5 361 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 SPATA4Q8NEY3 305 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 SP7Q8TDD2 431 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-226ENST00000483656 RIN2Q8WYP3 895 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-226ENST00000483656 CENPIQ92674 756 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-226ENST00000483656 FUBP3Q96I24 572 aaKnown RBP eCLIP10.59□□□□□ -0.71
HDAC6-226ENST00000483656 RNPC3Q96LT9 517 aaKnown RBP10.59□□□□□ -0.71
HDAC6-226ENST00000483656 CFAP57Q96MR6 1250 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 PGLYRP2Q96PD5 576 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 SLC2A13Q96QE2 648 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 PEBP4Q96S96 227 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 HERPUD2Q9BSE4 406 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 DDX23Q9BUQ8 820 aaKnown RBP10.59□□□□□ -0.71
HDAC6-226ENST00000483656 PNPLA8Q9NP80 782 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 CNGB3Q9NQW8 809 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 ASNSD1Q9NWL6 643 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 ABI2Q9NYB9 513 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-226ENST00000483656 SPG21Q9NZD8 308 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 NR2E1Q9Y466 385 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 PCDHB5Q9Y5E4 795 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 KIAA1671Q9BY89 1806 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 CUL9Q8IWT3 2517 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 COL4A4P53420 1690 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 TCRBV7S2A1N4TA0A589 114 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 LCHNA4D1U4 455 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 YJEFN3A6XGL0 299 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 E7ENQ6 273 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 PGRMC1O00264 195 aaKnown RBP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 HSF2BPO75031 334 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 DAB1O75553 588 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 FBXO21O94952 628 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 TRUB2O95900 331 aaKnown RBP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 ZBED1O96006 694 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 GLI1P08151 1106 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 USP17L7P0C7H9 530 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 RPL17P18621 184 aaKnown RBP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 MIPP30301 263 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 PCK1P35558 622 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 PAFAH1B1P43034 410 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 SSR1P43307 286 aaKnown RBP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 PTPN9P43378 593 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 ARPP19P56211 112 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 PITX1P78337 314 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 DSG1Q02413 1049 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 ACAP1Q15027 740 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 PSMD5Q16401 504 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 DDR2Q16832 855 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 ERCC6LQ2NKX8 1250 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 CCDC181Q5TID7 509 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 SDHAF4Q5VUM1 108 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 SLC8B1Q6J4K2 584 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 VSTM1Q6UX27 236 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 BNIPLQ7Z465 357 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 DDX53Q86TM3 631 aaKnown RBP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 SIX6OS1Q8N1H7 587 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 MMGT1Q8N4V1 131 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 FIBCD1Q8N539 461 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 FBXO22Q8NEZ5 403 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 SCAMP5Q8TAC9 235 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 PHOSPHO2Q8TCD6 241 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 CLP1Q92989 425 aaKnown RBP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 ACSF2Q96CM8 615 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 C8orf48Q96LL4 319 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 CLSTN3Q9BQT9 956 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 HTATIP2Q9BUP3 242 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 OXCT2Q9BYC2 517 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 EPC1Q9H2F5 836 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 RBM12Q9NTZ6 932 aaKnown RBP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.58□□□□□ -0.72
HDAC6-226ENST00000483656 CALCOCO1Q9P1Z2 691 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 SLC27A5Q9Y2P5 690 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 INSL6Q9Y581 213 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 CDY1Q9Y6F8 540 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 SLC4A7Q9Y6M7 1214 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 PATJQ8NI35 1801 aa10.58□□□□□ -0.72
HDAC6-226ENST00000483656 WDR27A2RRH5 827 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 C3orf70A6NLC5 250 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-226ENST00000483656 PI4K2BG5E9Z4 385 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 FSCN2O14926 492 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 LILRB3O75022 631 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 SOAT2O75908 522 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 ENDOD1O94919 500 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 FGGP02679 453 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 HAPLN1P10915 354 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-226ENST00000483656 CPB1P15086 417 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 SDC4P31431 198 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms