RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 ARID3AQ99856 593 aa18■□□□□ 0.47
HSPG2-209ENST00000480900 RNF38Q9H0F5 515 aa18■□□□□ 0.47
HSPG2-209ENST00000480900 PNPLA8Q9NP80 782 aa18■□□□□ 0.47
HSPG2-209ENST00000480900 CISHQ9NSE2 258 aa18■□□□□ 0.47
HSPG2-209ENST00000480900 DUS2Q9NX74 493 aaKnown RBP18■□□□□ 0.47
HSPG2-209ENST00000480900 KIAA1468Q9P260 1216 aa18■□□□□ 0.47
HSPG2-209ENST00000480900 KIAA1549LQ6ZVL6 1849 aa18■□□□□ 0.47
HSPG2-209ENST00000480900 GPR179Q6PRD1 2367 aa17.99■□□□□ 0.47
HSPG2-209ENST00000480900 MYO15AQ9UKN7 3530 aa17.99■□□□□ 0.47
HSPG2-209ENST00000480900 OTOL1A6NHN0 477 aaPredicted RBP17.99■□□□□ 0.47
HSPG2-209ENST00000480900 GFRA3O60609 400 aa17.99■□□□□ 0.47
HSPG2-209ENST00000480900 ZDHHC11BP0C7U3 371 aa17.99■□□□□ 0.47
HSPG2-209ENST00000480900 FMO5P49326 533 aa17.99■□□□□ 0.47
HSPG2-209ENST00000480900 AMPD2Q01433 879 aa17.99■□□□□ 0.47
HSPG2-209ENST00000480900 DDX42Q86XP3 938 aaKnown RBP eCLIP17.99■□□□□ 0.47
HSPG2-209ENST00000480900 SEMA4AQ9H3S1 761 aa17.99■□□□□ 0.47
HSPG2-209ENST00000480900 GMIPQ9P107 970 aa17.99■□□□□ 0.47
HSPG2-209ENST00000480900 WNT6Q9Y6F9 365 aa17.99■□□□□ 0.47
HSPG2-209ENST00000480900 MYO18AQ92614 2054 aaKnown RBP17.99■□□□□ 0.47
HSPG2-209ENST00000480900 SPAG17Q6Q759 2223 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 ZNF292O60281 2723 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 PRR23AA6NEV1 266 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 LEFTY2O00292 366 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 GNA14O95837 355 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 MBL2P11226 248 aaPredicted RBP17.98■□□□□ 0.47
HSPG2-209ENST00000480900 RAD23BP54727 409 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 YWHAEP62258 255 aaKnown RBP17.98■□□□□ 0.47
HSPG2-209ENST00000480900 ZXDBP98169 803 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 CSTF1Q05048 431 aaKnown RBP17.98■□□□□ 0.47
HSPG2-209ENST00000480900 CUL2Q13617 745 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 CCINQ13939 588 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 CAMK4Q16566 473 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 EML3Q32P44 896 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 ZNF394Q53GI3 561 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 HECTD3Q5T447 861 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 SYNPOQ8N3V7 929 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 SLC4A11Q8NBS3 891 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 TTC16Q8NEE8 873 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 CHFRQ96EP1 664 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 ECT2Q9H8V3 914 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 CHORDC1Q9UHD1 332 aaPredicted RBP17.98■□□□□ 0.47
HSPG2-209ENST00000480900 CPQQ9Y646 472 aa17.98■□□□□ 0.47
HSPG2-209ENST00000480900 HHLA1C9JL84 531 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 TRDMT1O14717 391 aaKnown RBP17.97■□□□□ 0.47
HSPG2-209ENST00000480900 P4HA2O15460 535 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 TBXAS1P24557 533 aaPredicted RBP17.97■□□□□ 0.47
HSPG2-209ENST00000480900 CCR3P51677 355 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 MARSP56192 900 aaKnown RBP17.97■□□□□ 0.47
HSPG2-209ENST00000480900 STX17P56962 302 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 PPP2R5DQ14738 602 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 TMEM196Q5HYL7 178 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 PPP1R26Q5T8A7 1209 aaPredicted RBP17.97■□□□□ 0.47
HSPG2-209ENST00000480900 CLEC17AQ6ZS10 378 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 GPRIN1Q7Z2K8 1008 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 SPEM1Q8N4L4 309 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 NELL1Q92832 810 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 EXOC4Q96A65 974 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 TMEM176AQ96HP8 235 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 HEXIM2Q96MH2 286 aaKnown RBP17.97■□□□□ 0.47
HSPG2-209ENST00000480900 DUSP16Q9BY84 665 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 FAM126AQ9BYI3 521 aaPredicted RBP17.97■□□□□ 0.47
HSPG2-209ENST00000480900 TLR8Q9NR97 1041 aaKnown RBP17.97■□□□□ 0.47
HSPG2-209ENST00000480900 RBM12Q9NTZ6 932 aaKnown RBP17.97■□□□□ 0.47
HSPG2-209ENST00000480900 SMPD4Q9NXE4 827 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 SCML2Q9UQR0 700 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 R4GN57 208 aa17.97■□□□□ 0.47
HSPG2-209ENST00000480900 SPTBN4Q9H254 2564 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 SLC9A3R1O14745 358 aaPredicted RBP17.96■□□□□ 0.47
HSPG2-209ENST00000480900 COCHO43405 550 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 NFATC1O95644 943 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 GJA4P35212 333 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 CETN1Q12798 172 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 GRSF1Q12849 480 aaKnown RBP eCLIP17.96■□□□□ 0.47
HSPG2-209ENST00000480900 NR1H3Q13133 447 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 GAS6Q14393 721 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 ARHGAP17Q68EM7 881 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 ASCL5Q7RTU5 278 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 TRIM59Q8IWR1 403 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 LINC00597Q9H2U6 94 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 ZSCAN32Q9NX65 697 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 CFAP97Q9P2B7 532 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 PCDHGA2Q9Y5H1 932 aa17.96■□□□□ 0.47
HSPG2-209ENST00000480900 CFAP54Q96N23 3096 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 FGFR1OPO95684 399 aaKnown RBP17.95■□□□□ 0.46
HSPG2-209ENST00000480900 TDGF1P13385 188 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 ACO1P21399 889 aaKnown RBP17.95■□□□□ 0.46
HSPG2-209ENST00000480900 KIF11P52732 1056 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 FSTL4Q6MZW2 842 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 Q6ZS52 159 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 UBR7Q8N806 425 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 JAKMIP2Q96AA8 810 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 ZFRQ96KR1 1074 aaKnown RBP17.95■□□□□ 0.46
HSPG2-209ENST00000480900 NT5C1BQ96P26 610 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 SRRTQ9BXP5 876 aaKnown RBP17.95■□□□□ 0.46
HSPG2-209ENST00000480900 CLSTN2Q9H4D0 955 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 CCSER2Q9H7U1 834 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 CYLDQ9NQC7 956 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 RWDD2AQ9UIY3 292 aa17.95■□□□□ 0.46
HSPG2-209ENST00000480900 E2F8A0AVK6 867 aa17.94■□□□□ 0.46
HSPG2-209ENST00000480900 CYP26A1O43174 497 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms