RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 GAB4Q2WGN9 574 aa19.49■□□□□ 0.71
DNMT3A-210ENST00000474807 LAIR1Q6GTX8 287 aa19.49■□□□□ 0.71
DNMT3A-210ENST00000474807 PRR23BQ6ZRT6 265 aa19.49■□□□□ 0.71
DNMT3A-210ENST00000474807 FILIP1Q7Z7B0 1213 aa19.49■□□□□ 0.71
DNMT3A-210ENST00000474807 ENGASEQ8NFI3 743 aa19.49■□□□□ 0.71
DNMT3A-210ENST00000474807 IMPG2Q9BZV3 1241 aa19.49■□□□□ 0.71
DNMT3A-210ENST00000474807 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.49■□□□□ 0.71
DNMT3A-210ENST00000474807 GMEB2Q9UKD1 530 aa19.49■□□□□ 0.71
DNMT3A-210ENST00000474807 RAB23Q9ULC3 237 aa19.49■□□□□ 0.71
DNMT3A-210ENST00000474807 ATG2BQ96BY7 2078 aa19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 COCHO43405 550 aa19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 MBL2P11226 248 aaPredicted RBP19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 OPRD1P41143 372 aa19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 NUCB2P80303 420 aa19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 ERMP1Q7Z2K6 904 aa19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 ZFRQ96KR1 1074 aaKnown RBP19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 MMRN2Q9H8L6 949 aa19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 CYP3A43Q9HB55 503 aa19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 TMEM8AQ9HCN3 771 aa19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 FAM49BQ9NUQ9 324 aa19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 POLR3BQ9NW08 1133 aaPredicted RBP19.48■□□□□ 0.71
DNMT3A-210ENST00000474807 CCDC163A0A0D9SF12 145 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 GTF2H1P32780 548 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 PRCPP42785 496 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 TUBP50607 506 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 MAP3K7CLP57077 242 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 FOXK2Q01167 660 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 COBLL1Q53SF7 1204 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 HECTD3Q5T447 861 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 KRT39Q6A163 491 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 DDX42Q86XP3 938 aaKnown RBP eCLIP19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 RPLP0P6Q8NHW5 317 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 SPATA20Q8TB22 786 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 WHAMMQ8TF30 809 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 EEF2KMTQ96G04 330 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 HNRNPABQ99729 332 aaKnown RBP19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 NT5C1AQ9BXI3 368 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 NIF3L1Q9GZT8 377 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 CCSER2Q9H7U1 834 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 PARD6AQ9NPB6 346 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 RMND1Q9NWS8 449 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 DLL3Q9NYJ7 618 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 GMIPQ9P107 970 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 CFAP97Q9P2B7 532 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 SLC8A2Q9UPR5 921 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 MYO16Q9Y6X6 1858 aa19.47■□□□□ 0.71
DNMT3A-210ENST00000474807 KIAA1549LQ6ZVL6 1849 aa19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 SLC9A3R1O14745 358 aaPredicted RBP19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 CYP17A1P05093 508 aa19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 RETP07949 1114 aa19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 PXNP49023 591 aaPredicted RBP19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 PGFP49763 221 aa19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 DHCR24Q15392 516 aa19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 ZNF658Q5TYW1 1059 aaPredicted RBP19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 CLEC20AQ6ZU45 233 aa19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 SYT13Q7L8C5 426 aa19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 CAMKK1Q8N5S9 505 aa19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 SEMA4DQ92854 862 aa19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 CYFIP2Q96F07 1278 aa19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 GSDMAQ96QA5 445 aa19.46■□□□□ 0.71
DNMT3A-210ENST00000474807 E2F8A0AVK6 867 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 GOLGA6L4A6NEF3 574 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 HHLA1C9JL84 531 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 SCAMP3O14828 347 aaKnown RBP19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 CETN3O15182 167 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 CILPO75339 1184 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 FAM200BP0CF97 657 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 ADORA2BP29275 332 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 PUM1Q14671 1186 aaKnown RBP eCLIP19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 RHBDF2Q6PJF5 856 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 CCDC150Q8NCX0 1101 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 FAXDC2Q96IV6 333 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 FBXO44Q9H4M3 255 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 CEP250Q9BV73 2442 aa19.45■□□□□ 0.7
DNMT3A-210ENST00000474807 MYH10P35580 1976 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 K7EQS6 105 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 EPB41P11171 864 aaKnown RBP19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 CD58P19256 250 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 TRIM21P19474 475 aaKnown RBP19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 MXI1P50539 228 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 SPEM2Q0P670 501 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 RSPO4Q2I0M5 234 aaPredicted RBP19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 GPRIN1Q7Z2K8 1008 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 ZC3H3Q8IXZ2 948 aaKnown RBP19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 GAB3Q8WWW8 586 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 ERCC4Q92889 916 aaPredicted RBP19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 TIGD1Q96MW7 591 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 DUSP9Q99956 384 aaKnown RBP19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 RAB20Q9NX57 234 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 TBC1D14Q9P2M4 693 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 USP18Q9UMW8 372 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 PCDHA5Q9Y5H7 936 aa19.44■□□□□ 0.7
DNMT3A-210ENST00000474807 CACNA1AO00555 2505 aa19.43■□□□□ 0.7
DNMT3A-210ENST00000474807 LRP3O75074 770 aa19.43■□□□□ 0.7
DNMT3A-210ENST00000474807 EIF2DP41214 584 aaKnown RBP19.43■□□□□ 0.7
DNMT3A-210ENST00000474807 PMS1P54277 932 aaKnown RBP19.43■□□□□ 0.7
DNMT3A-210ENST00000474807 DMC1Q14565 340 aa19.43■□□□□ 0.7
DNMT3A-210ENST00000474807 CEP68Q76N32 757 aa19.43■□□□□ 0.7
DNMT3A-210ENST00000474807 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.43■□□□□ 0.7
DNMT3A-210ENST00000474807 FAM160A2Q8N612 972 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms