RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.87□□□□□ -0.67
COL12A1-206ENST00000474564 PAXBP1Q9Y5B6 917 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 NCANO14594 1321 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 FSCN2O14926 492 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 TGM5O43548 720 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 NCK2O43639 380 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 ERBB2P04626 1255 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 SDC4P31431 198 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 CETN2P41208 172 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 SLC1A1P43005 524 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 SSR1P43307 286 aaKnown RBP10.86□□□□□ -0.67
COL12A1-206ENST00000474564 RPL34P49207 117 aaKnown RBP10.86□□□□□ -0.67
COL12A1-206ENST00000474564 SLC5A3P53794 718 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 HADHBP55084 474 aaKnown RBP10.86□□□□□ -0.67
COL12A1-206ENST00000474564 MAMLD1Q13495 774 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 HADHQ16836 314 aaKnown RBP10.86□□□□□ -0.67
COL12A1-206ENST00000474564 RSPO2Q6UXX9 243 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-206ENST00000474564 FAM183BPQ6ZVS7 135 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 RSRC2Q7L4I2 434 aaKnown RBP10.86□□□□□ -0.67
COL12A1-206ENST00000474564 ARCQ7LC44 396 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 DAAM2Q86T65 1068 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 XYLT1Q86Y38 959 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 REXO1L1PQ8IX06 675 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 OVCA2Q8WZ82 227 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 FBXO32Q969P5 355 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 MRPL38Q96DV4 380 aaKnown RBP10.86□□□□□ -0.67
COL12A1-206ENST00000474564 MCRS1Q96EZ8 462 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 PACSIN1Q9BY11 444 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 ULBP1Q9BZM6 244 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 NACA2Q9H009 215 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 POPDC2Q9HBU9 364 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 ABCC13Q9NSE7 274 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL12A1-206ENST00000474564 MAGED2Q9UNF1 606 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-206ENST00000474564 REXO2Q9Y3B8 237 aaKnown RBP10.86□□□□□ -0.67
COL12A1-206ENST00000474564 INSL5Q9Y5Q6 135 aa10.86□□□□□ -0.67
COL12A1-206ENST00000474564 SLC38A8A6NNN8 435 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 HIDE1A8MVS5 230 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 PIK3R2O00459 728 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 ADAM12O43184 909 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 BUB1O43683 1085 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 SPOPO43791 374 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 BEST1O76090 585 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 MTA2O94776 668 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 MOCS3O95396 460 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 ABL1P00519 1130 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 F9P00740 461 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 C8AP07357 584 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 HNRNPA1P09651 372 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL12A1-206ENST00000474564 USP17L7P0C7H9 530 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 PDGFRAP16234 1089 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 GPD1P21695 349 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 PSMA2P25787 234 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 CDR1P51861 262 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 DAOAP59103 153 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 ETF1P62495 437 aaKnown RBP10.85□□□□□ -0.67
COL12A1-206ENST00000474564 TWF1Q12792 350 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 MESDQ14696 234 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 RAB41Q5JT25 222 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 ZFYVE27Q5T4F4 411 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 ZNF697Q5TEC3 545 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 PRPF38BQ5VTL8 546 aaKnown RBP10.85□□□□□ -0.67
COL12A1-206ENST00000474564 PM20D1Q6GTS8 502 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 SLC26A9Q7LBE3 791 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 PEX26Q7Z412 305 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 PHLDB2Q86SQ0 1253 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 UBL4BQ8N7F7 174 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 LEMD2Q8NC56 503 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 SLC7A14Q8TBB6 771 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 GIPC2Q8TF65 315 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 CASP10Q92851 521 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 MCEEQ96PE7 176 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 RHOBTB2Q9BYZ6 727 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 LACRTQ9GZZ8 138 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 PIDD1Q9HB75 910 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 METTL5Q9NRN9 209 aaKnown RBP10.85□□□□□ -0.67
COL12A1-206ENST00000474564 OLA1Q9NTK5 396 aaKnown RBP10.85□□□□□ -0.67
COL12A1-206ENST00000474564 DZANK1Q9NVP4 752 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 TRPM5Q9NZQ8 1165 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 CYTH4Q9UIA0 394 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 FBXW11Q9UKB1 542 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 AMFRQ9UKV5 643 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 SCML2Q9UQR0 700 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 YIPF1Q9Y548 306 aa10.85□□□□□ -0.67
COL12A1-206ENST00000474564 FAM170AA1A519 330 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 CTAGE9A4FU28 777 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 TMEM191CA6NGB0 347 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 TMEM110-MUSTN1A8MSY1 372 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 MIF4GDA9UHW6 222 aaKnown RBP10.84□□□□□ -0.67
COL12A1-206ENST00000474564 TULP2O00295 520 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 PAPSS1O43252 624 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-206ENST00000474564 ATMINO43313 823 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-206ENST00000474564 CLASP2O75122 1294 aaKnown RBP10.84□□□□□ -0.67
COL12A1-206ENST00000474564 URI1O94763 535 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-206ENST00000474564 LTFP02788 710 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 SPATA31D3P0C874 917 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 NCAM1P13591 858 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 PTPN2P17706 415 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 DNAJB1P25685 340 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 HOXA9P31269 272 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms