RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 SMYD4Q8IYR2 804 aaPredicted RBP16.74■□□□□ 0.27
CDPF1-205ENST00000474256 C12orf29Q8N999 325 aa16.74■□□□□ 0.27
CDPF1-205ENST00000474256 TWNKQ96RR1 684 aa16.74■□□□□ 0.27
CDPF1-205ENST00000474256 IMPG2Q9BZV3 1241 aa16.74■□□□□ 0.27
CDPF1-205ENST00000474256 CYP3A43Q9HB55 503 aa16.74■□□□□ 0.27
CDPF1-205ENST00000474256 TMEM8AQ9HCN3 771 aa16.74■□□□□ 0.27
CDPF1-205ENST00000474256 SLC9A3R1O14745 358 aaPredicted RBP16.73■□□□□ 0.27
CDPF1-205ENST00000474256 COCHO43405 550 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 CYP17A1P05093 508 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 RETP07949 1114 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 MBL2P11226 248 aaPredicted RBP16.73■□□□□ 0.27
CDPF1-205ENST00000474256 GTF2H1P32780 548 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 OPRD1P41143 372 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 PNOCQ13519 176 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 BECN1Q14457 450 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 HECTD3Q5T447 861 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 DDX42Q86XP3 938 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDPF1-205ENST00000474256 CAMKK1Q8N5S9 505 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 ENGASEQ8NFI3 743 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 WHAMMQ8TF30 809 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 ZFRQ96KR1 1074 aaKnown RBP16.73■□□□□ 0.27
CDPF1-205ENST00000474256 HNRNPABQ99729 332 aaKnown RBP16.73■□□□□ 0.27
CDPF1-205ENST00000474256 PARD6AQ9NPB6 346 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDPF1-205ENST00000474256 FAM49BQ9NUQ9 324 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 DLL3Q9NYJ7 618 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 CFAP97Q9P2B7 532 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 SLC8A2Q9UPR5 921 aa16.73■□□□□ 0.27
CDPF1-205ENST00000474256 ANAPC1Q9H1A4 1944 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 MAP3K7CLP57077 242 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 NUCB2P80303 420 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 PUM1Q14671 1186 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDPF1-205ENST00000474256 DHCR24Q15392 516 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 COBLL1Q53SF7 1204 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 KRT39Q6A163 491 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 SYT13Q7L8C5 426 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 RPLP0P6Q8NHW5 317 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 SPATA20Q8TB22 786 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 GSDMAQ96QA5 445 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 NT5C1AQ9BXI3 368 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 NIF3L1Q9GZT8 377 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 POLR3BQ9NW08 1133 aaPredicted RBP16.72■□□□□ 0.27
CDPF1-205ENST00000474256 RMND1Q9NWS8 449 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 GMIPQ9P107 970 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 DNAH14Q0VDD8 3507 aa16.72■□□□□ 0.27
CDPF1-205ENST00000474256 E2F8A0AVK6 867 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 LRP3O75074 770 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 CILPO75339 1184 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 FAM200BP0CF97 657 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 TRIM21P19474 475 aaKnown RBP16.71■□□□□ 0.27
CDPF1-205ENST00000474256 PRCPP42785 496 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 PXNP49023 591 aaPredicted RBP16.71■□□□□ 0.27
CDPF1-205ENST00000474256 ZNF658Q5TYW1 1059 aaPredicted RBP16.71■□□□□ 0.27
CDPF1-205ENST00000474256 RHBDF2Q6PJF5 856 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 CLEC20AQ6ZU45 233 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 CCDC26Q8TAB7 109 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 EEF2KMTQ96G04 330 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 FAXDC2Q96IV6 333 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 DUSP9Q99956 384 aaKnown RBP16.71■□□□□ 0.27
CDPF1-205ENST00000474256 FBXO44Q9H4M3 255 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 CCSER2Q9H7U1 834 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 MMRN2Q9H8L6 949 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 TBC1D14Q9P2M4 693 aa16.71■□□□□ 0.27
CDPF1-205ENST00000474256 DMXL1Q9Y485 3027 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 ZNF638Q14966 1978 aaKnown RBP16.7■□□□□ 0.26
CDPF1-205ENST00000474256 GOLGA6L4A6NEF3 574 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 PRR5-ARHGAP8B1AHC4 643 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 HHLA1C9JL84 531 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 K7EQS6 105 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 SCAMP3O14828 347 aaKnown RBP16.7■□□□□ 0.26
CDPF1-205ENST00000474256 CETN3O15182 167 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 EPB41P11171 864 aaKnown RBP16.7■□□□□ 0.26
CDPF1-205ENST00000474256 ADORA2BP29275 332 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 EIF2DP41214 584 aaKnown RBP16.7■□□□□ 0.26
CDPF1-205ENST00000474256 PGFP49763 221 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 ARHGAP8P85298 464 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 LMNB2Q03252 620 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 SPEM2Q0P670 501 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 RSPO4Q2I0M5 234 aaPredicted RBP16.7■□□□□ 0.26
CDPF1-205ENST00000474256 ZC3H3Q8IXZ2 948 aaKnown RBP16.7■□□□□ 0.26
CDPF1-205ENST00000474256 CCDC150Q8NCX0 1101 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 GAB3Q8WWW8 586 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 SEMA4DQ92854 862 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 ACDQ96AP0 544 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 OTUB2Q96DC9 234 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 CYFIP2Q96F07 1278 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 PNPLA8Q9NP80 782 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 USP18Q9UMW8 372 aa16.7■□□□□ 0.26
CDPF1-205ENST00000474256 STX10O60499 249 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 CD58P19256 250 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 MXI1P50539 228 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 DMC1Q14565 340 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 CEP68Q76N32 757 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 GPRIN1Q7Z2K8 1008 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.69■□□□□ 0.26
CDPF1-205ENST00000474256 FAM160A2Q8N612 972 aaPredicted RBP16.69■□□□□ 0.26
CDPF1-205ENST00000474256 FBXL13Q8NEE6 735 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 USP33Q8TEY7 942 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 TIGD1Q96MW7 591 aa16.69■□□□□ 0.26
CDPF1-205ENST00000474256 HHIPQ96QV1 700 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms