RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-223ENST00000473542 ATG16L2Q8NAA4 619 aa5.47□□□□□ -1.53
BBX-223ENST00000473542 IPO4Q8TEX9 1081 aaKnown RBP5.47□□□□□ -1.53
BBX-223ENST00000473542 GCC1Q96CN9 775 aa5.47□□□□□ -1.53
BBX-223ENST00000473542 ALOXE3Q9BYJ1 711 aa5.47□□□□□ -1.53
BBX-223ENST00000473542 WDR26Q9H7D7 661 aa5.47□□□□□ -1.53
BBX-223ENST00000473542 UNKLQ9H9P5 680 aaKnown RBP5.47□□□□□ -1.53
BBX-223ENST00000473542 LRFN1Q9P244 771 aa5.47□□□□□ -1.53
BBX-223ENST00000473542 DNAJB11Q9UBS4 358 aa5.47□□□□□ -1.53
BBX-223ENST00000473542 HPSEQ9Y251 543 aa5.47□□□□□ -1.53
BBX-223ENST00000473542 hCG_1984214I3L0E3 225 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 RGS10O43665 173 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 CCNT2O60583 730 aaKnown RBP5.46□□□□□ -1.54
BBX-223ENST00000473542 SRGAP2O75044 1071 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 NTSR2O95665 410 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 NUDT3O95989 172 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 DHRS4L1P0CG22 281 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 SRGNP10124 158 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 FBLP22087 321 aaKnown RBP5.46□□□□□ -1.54
BBX-223ENST00000473542 DDX6P26196 483 aaKnown RBP eCLIP5.46□□□□□ -1.54
BBX-223ENST00000473542 PRKAR1BP31321 381 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 ITGA8P53708 1063 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 FAM189BP81408 668 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 RESTQ13127 1097 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 PRKG1Q13976 671 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 GEN1Q17RS7 908 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 TMTC4Q5T4D3 741 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 ARHGAP40Q5TG30 622 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 RGS7BPQ6MZT1 257 aaPredicted RBP5.46□□□□□ -1.54
BBX-223ENST00000473542 GGT6Q6P531 493 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 RHOUQ7L0Q8 258 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 KCTD20Q7Z5Y7 419 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.46□□□□□ -1.54
BBX-223ENST00000473542 MBD3L2Q8NHZ7 208 aaPredicted RBP5.46□□□□□ -1.54
BBX-223ENST00000473542 STT3BQ8TCJ2 826 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 SLC25A43Q8WUT9 341 aaPredicted RBP5.46□□□□□ -1.54
BBX-223ENST00000473542 HAS1Q92839 578 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 TMEM125Q96AQ2 219 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 FAM136AQ96C01 138 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 RNF31Q96EP0 1072 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 NUDT22Q9BRQ3 303 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 AMBRA1Q9C0C7 1298 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 SLC25A32Q9H2D1 315 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 TP63Q9H3D4 680 aaPredicted RBP5.46□□□□□ -1.54
BBX-223ENST00000473542 TRIM36Q9NQ86 728 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 GRHPRQ9UBQ7 328 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 VPS51Q9UID3 782 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 HERC5Q9UII4 1024 aaKnown RBP5.46□□□□□ -1.54
BBX-223ENST00000473542 GTF2A1LQ9UNN4 478 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 SSX2IPQ9Y2D8 614 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 MRPS17Q9Y2R5 130 aaKnown RBP5.46□□□□□ -1.54
BBX-223ENST00000473542 GPR52Q9Y2T5 361 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 PCDHGB3Q9Y5G1 929 aa5.46□□□□□ -1.54
BBX-223ENST00000473542 TRGV11A0A075B6L2 103 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 AQP12BA6NM10 295 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 PIP5K1BO14986 540 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 LMNAP02545 664 aaKnown RBP5.45□□□□□ -1.54
BBX-223ENST00000473542 ITGA2BP08514 1039 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 LAG3P18627 525 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 GATA3P23771 443 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 EPHA3P29320 983 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 PTGS2P35354 604 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 KCNAB1Q14722 419 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 CLCA4Q14CN2 919 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 DTX2Q86UW9 622 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 ABRAQ8N0Z2 381 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 ZNF276Q8N554 614 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 CPEB3Q8NE35 698 aaKnown RBP5.45□□□□□ -1.54
BBX-223ENST00000473542 DNAJB14Q8TBM8 379 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 ABHD5Q8WTS1 349 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 STYXQ8WUJ0 223 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 TBC1D20Q96BZ9 403 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 PRPF18Q99633 342 aaKnown RBP5.45□□□□□ -1.54
BBX-223ENST00000473542 INO80BQ9C086 356 aaPredicted RBP5.45□□□□□ -1.54
BBX-223ENST00000473542 UBA5Q9GZZ9 404 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 ZNF768Q9H5H4 540 aaKnown RBP5.45□□□□□ -1.54
BBX-223ENST00000473542 CASS4Q9NQ75 786 aa5.45□□□□□ -1.54
BBX-223ENST00000473542 COL15A1P39059 1388 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 IRAK2O43187 625 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 PROM1O43490 865 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 VIPP01282 170 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 ARP10275 920 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 PECAM1P16284 738 aaPredicted RBP5.44□□□□□ -1.54
BBX-223ENST00000473542 PAX3P23760 479 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 UQCRC1P31930 480 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 NXPH1P58417 271 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 ITIH3Q06033 890 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 EFR3AQ14156 821 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 PTCHD3Q3KNS1 767 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 ARHGAP15Q53QZ3 475 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 ALFQ53S48 1182 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 TEDDM1Q5T9Z0 273 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 VPS53Q5VIR6 699 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 ABLIM2Q6H8Q1 611 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 LNX2Q8N448 690 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 OTUD7AQ8TE49 926 aaPredicted RBP5.44□□□□□ -1.54
BBX-223ENST00000473542 PNISRQ8TF01 805 aaKnown RBP5.44□□□□□ -1.54
BBX-223ENST00000473542 LENG9Q96B70 501 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 EVI5LQ96CN4 794 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 RSPRY1Q96DX4 576 aa5.44□□□□□ -1.54
BBX-223ENST00000473542 NAF1Q96HR8 494 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms