RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 FNIP2Q9P278 1114 aa12.73□□□□□ -0.37
VPS16-206ENST00000466415 AFF4Q9UHB7 1163 aaKnown RBP12.73□□□□□ -0.37
VPS16-206ENST00000466415 MSRAQ9UJ68 235 aa12.73□□□□□ -0.37
VPS16-206ENST00000466415 SNX12Q9UMY4 172 aa12.73□□□□□ -0.37
VPS16-206ENST00000466415 SLC27A5Q9Y2P5 690 aa12.73□□□□□ -0.37
VPS16-206ENST00000466415 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.73□□□□□ -0.37
VPS16-206ENST00000466415 NLRC5Q86WI3 1866 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 CCDC66A2RUB6 948 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 C2CD4BA6NLJ0 364 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 DPYSL4O14531 572 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 KCNK3O14649 394 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 CAPN9O14815 690 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 GABBR2O75899 941 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 RNF8O76064 485 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 RTN3O95197 1032 aaPredicted RBP12.72□□□□□ -0.37
VPS16-206ENST00000466415 CXCL14O95715 111 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 USP17L7P0C7H9 530 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 MYOGP15173 224 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 PDGFRAP16234 1089 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 CTNNA2P26232 953 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 GJC1P36383 396 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 TUFMP49411 452 aaKnown RBP12.72□□□□□ -0.37
VPS16-206ENST00000466415 GPR15P49685 360 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 ZNF143P52747 638 aaPredicted RBP12.72□□□□□ -0.37
VPS16-206ENST00000466415 DUSP4Q13115 394 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 RAB30Q15771 203 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 DDR2Q16832 855 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 HADHQ16836 314 aaKnown RBP12.72□□□□□ -0.37
VPS16-206ENST00000466415 ODF2Q5BJF6 829 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 ZFYVE27Q5T4F4 411 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 CCDC181Q5TID7 509 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 SDHAF4Q5VUM1 108 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 PLPP4Q5VZY2 271 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 FAM109BQ6ICB4 259 aaPredicted RBP12.72□□□□□ -0.37
VPS16-206ENST00000466415 RHOT1Q8IXI2 618 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 TTC9BQ8N6N2 239 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 NIPA2Q8N8Q9 360 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 OSBPL9Q96SU4 736 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 PSMB7Q99436 277 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 CNPY3Q9BT09 278 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 TLR10Q9BXR5 811 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 FBXO44Q9H4M3 255 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 CYP4F11Q9HBI6 524 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 ALG13Q9NP73 1137 aaKnown RBP12.72□□□□□ -0.37
VPS16-206ENST00000466415 TLR9Q9NR96 1032 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.72□□□□□ -0.37
VPS16-206ENST00000466415 TMEM59LQ9UK28 342 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 STAP1Q9ULZ2 295 aa12.72□□□□□ -0.37
VPS16-206ENST00000466415 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.71□□□□□ -0.37
VPS16-206ENST00000466415 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.71□□□□□ -0.37
VPS16-206ENST00000466415 C5orf67F2Z3F1 127 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 H0YGN5 161 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 PRRG1O14668 218 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 PSTPIP1O43586 416 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 LTFP02788 710 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 ADH1AP07327 375 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 CTNNA1P35221 906 aaKnown RBP12.71□□□□□ -0.37
VPS16-206ENST00000466415 FLT3P36888 993 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 ALDH1A3P47895 512 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 SULT1E1P49888 294 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 YWHAZP63104 245 aaKnown RBP12.71□□□□□ -0.37
VPS16-206ENST00000466415 OGDHQ02218 1023 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 CKAP4Q07065 602 aaKnown RBP12.71□□□□□ -0.37
VPS16-206ENST00000466415 ZNF252P-AS1Q0IIN9 211 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 RAB33AQ14088 237 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 VEPH1Q14D04 833 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 ACAP1Q15027 740 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 TAF5Q15542 800 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 CDO1Q16878 200 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 SEL1L2Q5TEA6 688 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 CC2D1AQ6P1N0 951 aaPredicted RBP12.71□□□□□ -0.37
VPS16-206ENST00000466415 DENND5BQ6ZUT9 1274 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 ARCQ7LC44 396 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 SCML4Q8N228 414 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 ZNF461Q8TAF7 563 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 MICAL1Q8TDZ2 1067 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 POF1BQ8WVV4 589 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 NDRG1Q92597 394 aaKnown RBP12.71□□□□□ -0.37
VPS16-206ENST00000466415 HES6Q96HZ4 224 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 PBKQ96KB5 322 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 CAPZA3Q96KX2 299 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 SPATA17Q96L03 361 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 GDF15Q99988 308 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 NCAPGQ9BPX3 1015 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 POPDC2Q9HBU9 364 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 RXFP1Q9HBX9 757 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 EHD2Q9NZN4 543 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 HSFX1Q9UBD0 423 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 CDC23Q9UJX2 597 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 MRFAP1Q9Y605 127 aa12.71□□□□□ -0.37
VPS16-206ENST00000466415 PATJQ8NI35 1801 aa12.71□□□□□ -0.38
VPS16-206ENST00000466415 MYH10P35580 1976 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 PTPRDP23468 1912 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 TNFRSF10BO14763 440 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 TEX28O15482 410 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 SOAT2O75908 522 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 VNN2O95498 520 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 ATF2P15336 505 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 PRLRP16471 622 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 CXCR5P32302 372 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms