RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 DAB1O75553 588 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 SOD2P04179 222 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 IGFBP6P24592 240 aaPredicted RBP9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 SDC4P31431 198 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 PTPN7P35236 360 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 RGS7P49802 495 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 PEX5P50542 639 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 DEFB103AP81534 67 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 MRPS5P82675 430 aaKnown RBP9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 ADIGQ0VDE8 80 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 C2CD6Q53TS8 623 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 SPOUT1Q5T280 376 aaKnown RBP9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 SLC8B1Q6J4K2 584 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 DDX53Q86TM3 631 aaKnown RBP9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 SLC39A11Q8N1S5 342 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 COLGALT1Q8NBJ5 622 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 EXD1Q8NHP7 514 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 COG1Q8WTW3 980 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 UBXN4Q92575 508 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 BADQ92934 168 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 CLP1Q92989 425 aaKnown RBP9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 C8orf48Q96LL4 319 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 RNPC3Q96LT9 517 aaKnown RBP9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 RUNDC3BQ96NL0 473 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 SMOQ99835 787 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 LBHD1Q9BQE6 289 aaPredicted RBP9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 GPR62Q9BZJ7 368 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 GOLPH3Q9H4A6 298 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 CHST7Q9NS84 486 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 EHD2Q9NZN4 543 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 CHORDC1Q9UHD1 332 aaPredicted RBP9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 STAP1Q9ULZ2 295 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 PACSIN2Q9UNF0 486 aaPredicted RBP9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 EFR3BQ9Y2G0 817 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 PCDHB12Q9Y5F1 795 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 PTPRDP23468 1912 aa9.35□□□□□ -0.91
CDC42EP3-204ENST00000457889 ZBBXA8MT70 800 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 F8W810 466 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 TULP2O00295 520 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 CLDN5O00501 218 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 DYNC1I1O14576 645 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 CEP104O60308 925 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 SRGAP2O75044 1071 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 ZBED1O96006 694 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 PDGFRAP16234 1089 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 MATKP42679 507 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 GLUD2P49448 558 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 TKTL1P51854 596 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 MAP3K7CLP57077 242 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 RPL10AP62906 217 aaKnown RBP9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 YWHAZP63104 245 aaKnown RBP9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 DSG1Q02413 1049 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 KRT17Q04695 432 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 ADCY1Q08828 1119 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 ZNF252P-AS1Q0IIN9 211 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 SLC39A12Q504Y0 691 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 GLE1Q53GS7 698 aaKnown RBP9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 BOLA3Q53S33 107 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 ODF2Q5BJF6 829 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 TMEM240Q5SV17 173 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 TPGS2Q68CL5 300 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 PM20D1Q6GTS8 502 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 KIAA1841Q6NSI8 718 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 CC2D1AQ6P1N0 951 aaPredicted RBP9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 ZNF365Q70YC5 407 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 RSRC2Q7L4I2 434 aaKnown RBP9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 STRADAQ7RTN6 431 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 OTOP2Q7RTS6 562 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 LRRTM3Q86VH5 581 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 CEP57Q86XR8 500 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 PSTKQ8IV42 348 aaKnown RBP9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 SCUBE3Q8IX30 993 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 C7orf61Q8IZ16 206 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 RCOR2Q8IZ40 523 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 ARHGAP18Q8N392 663 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 MMGT1Q8N4V1 131 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 FIBCD1Q8N539 461 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 SPATA4Q8NEY3 305 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 TEKT4Q8WW24 435 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 ALG3Q92685 438 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 BTBD6Q96KE9 485 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 SPATA17Q96L03 361 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 SLC2A13Q96QE2 648 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 RAD9AQ99638 391 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 DDX23Q9BUQ8 820 aaKnown RBP9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 TRIM7Q9C029 511 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 FBXO44Q9H4M3 255 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 POPDC2Q9HBU9 364 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 HOMER3Q9NSC5 361 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 TJP2Q9UDY2 1190 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 MTUS1Q9ULD2 1270 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 USP3Q9Y6I4 520 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 SLC4A7Q9Y6M7 1214 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 ALPK3Q96L96 1907 aa9.34□□□□□ -0.91
CDC42EP3-204ENST00000457889 PATJQ8NI35 1801 aa9.33□□□□□ -0.92
CDC42EP3-204ENST00000457889 VWA8A3KMH1 1905 aa9.33□□□□□ -0.92
CDC42EP3-204ENST00000457889 UQCRHLA0A096LP55 91 aa9.33□□□□□ -0.92
CDC42EP3-204ENST00000457889 TARSL2A2RTX5 802 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms