RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 AAASQ9NRG9 546 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 HCSTQ9UBK5 93 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 FEZ2Q9UHY8 353 aaPredicted RBP11.25□□□□□ -0.61
PKP4-206ENST00000452162 TBKBP1A7MCY6 615 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 GOLGA8SH3BPF8 625 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 ERBB2P04626 1255 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 VDRP11473 427 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 SKIP12755 728 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 RARGP13631 454 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 ITIH2P19823 946 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 RFC1P35251 1148 aaPredicted RBP11.25□□□□□ -0.61
PKP4-206ENST00000452162 PSMC1P62191 440 aaKnown RBP11.25□□□□□ -0.61
PKP4-206ENST00000452162 CALCOCO2Q13137 446 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 PDCLQ13371 301 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 BTG3Q14201 252 aaPredicted RBP11.25□□□□□ -0.61
PKP4-206ENST00000452162 KRT71Q3SY84 523 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 DENND2CQ68D51 928 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 SPOCD1Q6ZMY3 1216 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 MRPL10Q7Z7H8 261 aaKnown RBP11.25□□□□□ -0.61
PKP4-206ENST00000452162 FNIP1Q8TF40 1166 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 CASD1Q96PB1 797 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 APOL6Q9BWW8 343 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 TRIM6Q9C030 488 aaPredicted RBP11.25□□□□□ -0.61
PKP4-206ENST00000452162 CXCL16Q9H2A7 254 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 CENPHQ9H3R5 247 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 PLEKHA5Q9HAU0 1116 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 DDX56Q9NY93 547 aaKnown RBP11.25□□□□□ -0.61
PKP4-206ENST00000452162 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 ASIC3Q9UHC3 531 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 BARX2Q9UMQ3 279 aaPredicted RBP11.25□□□□□ -0.61
PKP4-206ENST00000452162 DERAQ9Y315 318 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 KRT3P12035 628 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 CYP3A5P20815 502 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 CETN2P41208 172 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 GABRB2P47870 512 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 AFF1P51825 1210 aaKnown RBP11.24□□□□□ -0.61
PKP4-206ENST00000452162 NDST1P52848 882 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 IFFO1Q0D2I5 559 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 ZNF268Q14587 947 aaPredicted RBP11.24□□□□□ -0.61
PKP4-206ENST00000452162 CNGA2Q16280 664 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 ZNF697Q5TEC3 545 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 TTC19Q6DKK2 380 aaPredicted RBP11.24□□□□□ -0.61
PKP4-206ENST00000452162 FOXR1Q6PIV2 292 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 POLNQ7Z5Q5 900 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 ARFGAP1Q8N6T3 406 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 RAPGEF5Q92565 580 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 TLCD1Q96CP7 247 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 SNX27Q96L92 541 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 CCDC114Q96M63 670 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 FAM118BQ9BPY3 351 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 COL6A3P12111 3177 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 REV3LO60673 3130 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 hCG_1818297A0A087WSY0 165 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 C3orf70A6NLC5 250 aaPredicted RBP11.24□□□□□ -0.61
PKP4-206ENST00000452162 M0QYV0 167 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 RIPK2O43353 540 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 LIASO43766 372 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 LINC00271P0C7V0 271 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 KRT10P13645 584 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 ATF2P15336 505 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 AKAP5P24588 427 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 PSMA2P25787 234 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 GPD2P43304 727 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 SLC25A11Q02978 314 aaKnown RBP11.24□□□□□ -0.61
PKP4-206ENST00000452162 SLC29A2Q14542 456 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 GPR153Q6NV75 609 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 DRICH1Q6PGQ1 229 aaPredicted RBP11.24□□□□□ -0.61
PKP4-206ENST00000452162 HOOK3Q86VS8 718 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 CMTR2Q8IYT2 770 aaKnown RBP11.24□□□□□ -0.61
PKP4-206ENST00000452162 FIBCD1Q8N539 461 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 TTC39CQ8N584 583 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 MCRS1Q96EZ8 462 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 ZMAT2Q96NC0 199 aaKnown RBP11.24□□□□□ -0.61
PKP4-206ENST00000452162 C17orf80Q9BSJ5 609 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 TMEM109Q9BVC6 243 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 METTL5Q9NRN9 209 aaKnown RBP11.24□□□□□ -0.61
PKP4-206ENST00000452162 SNTG2Q9NY99 539 aa11.24□□□□□ -0.61
PKP4-206ENST00000452162 MRPL42Q9Y6G3 142 aaKnown RBP11.24□□□□□ -0.61
PKP4-206ENST00000452162 PRUNE2Q8WUY3 3088 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 TJP3O95049 919 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 KLRC2P26717 231 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 CDKN2BP42772 138 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 ITGA8P53708 1063 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 CAV1Q03135 178 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 GRIN2CQ14957 1233 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 TRIP13Q15645 432 aaPredicted RBP11.23□□□□□ -0.61
PKP4-206ENST00000452162 ZBTB6Q15916 424 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
PKP4-206ENST00000452162 ABI1Q8IZP0 508 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 DEFB123Q8N688 67 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 ARFGAP2Q8N6H7 521 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 ACSF2Q96CM8 615 aaPredicted RBP11.23□□□□□ -0.61
PKP4-206ENST00000452162 PGBD4Q96DM1 585 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 HEXIM2Q96MH2 286 aaKnown RBP11.23□□□□□ -0.61
PKP4-206ENST00000452162 RSAD1Q9HA92 442 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 SLC12A6Q9UHW9 1150 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 NOVA2Q9UNW9 492 aaKnown RBP11.23□□□□□ -0.61
PKP4-206ENST00000452162 INPP5FQ9Y2H2 1132 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 PRRC2BQ5JSZ5 2229 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms