RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 MYO6Q9UM54 1294 aa13.79□□□□□ -0.2
ERGIC3-209ENST00000447986 PCDHGC3Q9UN70 934 aa13.79□□□□□ -0.2
ERGIC3-209ENST00000447986 SCML2Q9UQR0 700 aa13.79□□□□□ -0.2
ERGIC3-209ENST00000447986 TCF20Q9UGU0 1960 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 TRAV19A0A0A6YYK7 116 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 ZNF840PA6NDX5 716 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 TADA3O75528 432 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 GFPT2O94808 682 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 CALCAP01258 141 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 USP17L7P0C7H9 530 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 ACADSBP45954 432 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 TKTL1P51854 596 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 JAM2P57087 298 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 SNX16P57768 344 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 RAB41Q5JT25 222 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 FAM78AQ5JUQ0 283 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 STXBP5Q5T5C0 1151 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 TXNDC8Q6A555 127 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 GPRIN1Q7Z2K8 1008 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 CCDC186Q7Z3E2 898 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 ZNF677Q86XU0 584 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 ARHGAP18Q8N392 663 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 HSFY1Q96LI6 401 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 SLC46A2Q9BY10 475 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 EDEM3Q9BZQ6 932 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 XPO4Q9C0E2 1151 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 CHORDC1Q9UHD1 332 aaPredicted RBP13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 SORCS3Q9UPU3 1222 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 USP3Q9Y6I4 520 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 NUMBLQ9Y6R0 609 aa13.78□□□□□ -0.2
ERGIC3-209ENST00000447986 ANHXE9PGG2 379 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 ECI2O75521 394 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 ZBED1O96006 694 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 CKMP06732 381 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 HDCP19113 662 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 WEE1P30291 646 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 GPD2P43304 727 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 TUBP50607 506 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 ADIGQ0VDE8 80 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 HTR4Q13639 388 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 FIGNQ5HY92 759 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 PARM1Q6UWI2 310 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 TADA2BQ86TJ2 420 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 ARID3BQ8IVW6 561 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 ZNF397Q8NF99 534 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 STK32AQ8WU08 396 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 FGF14Q92915 247 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 ELSPBP1Q96BH3 223 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 ZSWIM3Q96MP5 696 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 COL25A1Q9BXS0 654 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 NACA2Q9H009 215 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 LHX5Q9H2C1 402 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 KIF9Q9HAQ2 790 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 TRPV4Q9HBA0 871 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 CNGB3Q9NQW8 809 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 ST7Q9NRC1 585 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 GMIPQ9P107 970 aa13.77□□□□□ -0.21
ERGIC3-209ENST00000447986 TULP2O00295 520 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 ASGR2P07307 311 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 RALAP11233 206 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 LCP1P13796 627 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 FERP16591 822 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 TDGQ13569 410 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 PTPN21Q16825 1174 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 HECTD3Q5T447 861 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 SNX30Q5VWJ9 437 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 PMF1Q6P1K2 205 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 DENND1BQ6P3S1 775 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 CELF5Q8N6W0 485 aaKnown RBP13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 EPS8L1Q8TE68 723 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 GOLGA1Q92805 767 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 CDK5RAP1Q96SZ6 601 aaKnown RBP13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 NUCKS1Q9H1E3 243 aaKnown RBP13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 CD320Q9NPF0 282 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 CYLDQ9NQC7 956 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 TDP1Q9NUW8 608 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 OBP2AQ9NY56 170 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.76□□□□□ -0.218e-10■■■□□ 16
ERGIC3-209ENST00000447986 NOTCH4Q99466 2003 aa13.76□□□□□ -0.21
ERGIC3-209ENST00000447986 TNFRSF10AO00220 468 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 NRG2O14511 850 aaPredicted RBP13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 SART1O43290 800 aaKnown RBP13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 FBXO21O94952 628 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 ZDHHC11BP0C7U3 371 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 ALADP13716 330 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 RGS7P49802 495 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 ARID5AQ03989 594 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 PASD1Q8IV76 773 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 YAF2Q8IY57 180 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 UBALD2Q8IYN6 164 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 SCML4Q8N228 414 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 SLC44A3Q8N4M1 653 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 ARL14EPQ8N8R7 260 aaPredicted RBP13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 TMEM35BQ8NCS4 154 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 MSANTD4Q8NCY6 345 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 IPO4Q8TEX9 1081 aaKnown RBP13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 DEPDC1BQ8WUY9 529 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 KXD1Q9BQD3 176 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 ULBP1Q9BZM6 244 aa13.75□□□□□ -0.21
ERGIC3-209ENST00000447986 CLIC5Q9NZA1 410 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms