RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ETV4P43268 484 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 TUBA4AP68366 448 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 KDSRQ06136 332 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 TRIP13Q15645 432 aaPredicted RBP19.96■□□□□ 0.79
HMGA1-205ENST00000447654 KLHL38Q2WGJ6 581 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 RARS2Q5T160 578 aaKnown RBP19.96■□□□□ 0.79
HMGA1-205ENST00000447654 KBTBD6Q86V97 674 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 SLC25A41Q8N5S1 370 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 ACTRT2Q8TDY3 377 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 MZB1Q8WU39 189 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 PRPF18Q99633 342 aaKnown RBP19.96■□□□□ 0.79
HMGA1-205ENST00000447654 DRC3Q9H069 523 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.96■□□□□ 0.79
HMGA1-205ENST00000447654 GIN1Q9NXP7 522 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 TMOD2Q9NZR1 351 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 ZNF70Q9UC06 446 aaPredicted RBP19.96■□□□□ 0.79
HMGA1-205ENST00000447654 GTF3C4Q9UKN8 822 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 ARHGAP42A6NI28 874 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 DNALI1O14645 258 aaPredicted RBP19.95■□□□□ 0.78
HMGA1-205ENST00000447654 CNOT3O75175 753 aaKnown RBP19.95■□□□□ 0.78
HMGA1-205ENST00000447654 CRTAMO95727 393 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 KRT18P05783 430 aaKnown RBP19.95■□□□□ 0.78
HMGA1-205ENST00000447654 C8BP07358 591 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 THRAP10827 490 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 BMP3P12645 472 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 HOXA13P31271 388 aaPredicted RBP19.95■□□□□ 0.78
HMGA1-205ENST00000447654 RPS3AP61247 264 aaKnown RBP19.95■□□□□ 0.78
HMGA1-205ENST00000447654 PTP4A2Q12974 167 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 IKQ13123 557 aaPredicted RBP19.95■□□□□ 0.78
HMGA1-205ENST00000447654 IL23RQ5VWK5 629 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 LPCAT2Q7L5N7 544 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 IQCF2Q8IXL9 164 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 ADCY4Q8NFM4 1077 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 LENG9Q96B70 501 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 GPATCH1Q9BRR8 931 aaKnown RBP19.95■□□□□ 0.78
HMGA1-205ENST00000447654 NUF2Q9BZD4 464 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 INTS2Q9H0H0 1204 aaKnown RBP19.95■□□□□ 0.78
HMGA1-205ENST00000447654 GBA3Q9H227 469 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 VPS37BQ9H9H4 285 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 PARVBQ9HBI1 364 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 CCPG1Q9ULG6 757 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 SYNPO2Q9UMS6 1093 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 TTLL3Q9Y4R7 772 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 AP4B1Q9Y6B7 739 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 E9PMD0 336 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 POLR2MP0CAP2 368 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 MORF4L2Q15014 288 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 PQLC1Q8N2U9 271 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 CYP2W1Q8TAV3 490 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 ETNPPLQ8TBG4 499 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 AMNQ9BXJ7 453 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 CNTN3Q9P232 1028 aa19.95■□□□□ 0.78
HMGA1-205ENST00000447654 SF3B1O75533 1304 aaKnown RBP eCLIP19.95■□□□□ 0.785e-6■■■■■ 33.9
HMGA1-205ENST00000447654 POTEB3A0JP26 581 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 CAPN8A6NHC0 703 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 FAM86B1E9PN63 330 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 I3L4J1 428 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 FAM86B2P0C5J1 330 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 HOXD13P35453 343 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 CAMK2BQ13554 666 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 DCLRE1AQ6PJP8 1040 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 POTEBQ6S5H4 581 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 CCDC33Q8N5R6 958 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 SREK1Q8WXA9 508 aaKnown RBP19.94■□□□□ 0.78
HMGA1-205ENST00000447654 BHMTQ93088 406 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 ANKRD36BP1Q96IX9 119 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 MBOAT7Q96N66 472 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 NUP85Q9BW27 656 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 TMEM39BQ9GZU3 492 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 TPK1Q9H3S4 243 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 GNPTGQ9UJJ9 305 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 ASTN1O14525 1302 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 ASTN2O75129 1339 aaPredicted RBP19.94■□□□□ 0.78
HMGA1-205ENST00000447654 CYP3A7-CYP3A51PA0A087WV96 503 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 FAM237BA0A1B0GVD1 139 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 RBP3P10745 1247 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 CYP3A7P24462 503 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 SERPINB6P35237 376 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 RXRGP48443 463 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 SPIRE1Q08AE8 756 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 PDIA2Q13087 525 aaKnown RBP19.94■□□□□ 0.78
HMGA1-205ENST00000447654 FBXO11Q86XK2 927 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 RAB3IL1Q8TBN0 382 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 SRPK1Q96SB4 655 aaKnown RBP19.94■□□□□ 0.78
HMGA1-205ENST00000447654 INO80BQ9C086 356 aaPredicted RBP19.94■□□□□ 0.78
HMGA1-205ENST00000447654 ITGA11Q9UKX5 1188 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 PRR12Q9ULL5 1215 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 KIAA1024Q9UPX6 916 aa19.94■□□□□ 0.78
HMGA1-205ENST00000447654 MARCH6O60337 910 aa19.93■□□□□ 0.78
HMGA1-205ENST00000447654 MED24O75448 989 aa19.93■□□□□ 0.78
HMGA1-205ENST00000447654 TSHRP16473 764 aa19.93■□□□□ 0.78
HMGA1-205ENST00000447654 STT3AP46977 705 aa19.93■□□□□ 0.78
HMGA1-205ENST00000447654 CACNB1Q02641 598 aaPredicted RBP19.93■□□□□ 0.78
HMGA1-205ENST00000447654 MYBPC2Q14324 1141 aa19.93■□□□□ 0.78
HMGA1-205ENST00000447654 PRR16Q569H4 304 aa19.93■□□□□ 0.78
HMGA1-205ENST00000447654 RABGAP1LQ5R372 815 aa19.93■□□□□ 0.78
HMGA1-205ENST00000447654 ATG16L1Q676U5 607 aa19.93■□□□□ 0.78
HMGA1-205ENST00000447654 SLC30A10Q6XR72 485 aa19.93■□□□□ 0.78
HMGA1-205ENST00000447654 ATG4AQ8WYN0 398 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms