RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 STARD13Q9Y3M8 1113 aa15.31■□□□□ 0.04
SYNCRIP-203ENST00000444272 TRIM24O15164 1050 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 USP12O75317 370 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 TULP3O75386 442 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 ITGB2P05107 769 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 LRPAP1P30533 357 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 ADD1P35611 737 aaKnown RBP15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 INHBCP55103 352 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 SPAG1Q07617 926 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 ST3GAL1Q11201 340 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 LY6G5CQ5SRR4 150 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 NUDT18Q6ZVK8 323 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 ADAT2Q7Z6V5 191 aaKnown RBP15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 LRRTM3Q86VH5 581 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 ETFBKMTQ8IXQ9 262 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 MCPH1Q8NEM0 835 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 OSBPL3Q9H4L5 887 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 POLR1BQ9H9Y6 1135 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 WDR70Q9NW82 654 aa15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 RBM8AQ9Y5S9 174 aaKnown RBP15.3■□□□□ 0.04
SYNCRIP-203ENST00000444272 SLC9A3R1O14745 358 aaPredicted RBP15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 DFNA5O60443 496 aa15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 NOL4O94818 638 aa15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 LYPLA2O95372 231 aa15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 HARSP12081 509 aaKnown RBP15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 OXTRP30559 389 aa15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 NAMPTP43490 491 aa15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 NLRP5P59047 1200 aa15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 HNRNPUQ00839 825 aaKnown RBP eCLIP15.29■□□□□ 0.045e-7■□□□□ 11.1
SYNCRIP-203ENST00000444272 GAD2Q05329 585 aa15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 TICAM1Q8IUC6 712 aa15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 SAP25Q8TEE9 199 aa15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 CCDC97Q96F63 343 aaPredicted RBP15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 TRMT2BQ96GJ1 504 aaKnown RBP15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 SENP8Q96LD8 212 aa15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 EIF2AK1Q9BQI3 630 aaKnown RBP15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 SLC25A18Q9H1K4 315 aa15.29■□□□□ 0.04
SYNCRIP-203ENST00000444272 WASH3PC4AMC7 463 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 EFSO43281 561 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 TRAK2O60296 914 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 PRPF40AO75400 957 aaKnown RBP15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 CKMT2P17540 419 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 GRIK1P39086 918 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 SKOR1P84550 965 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 NCAPHQ15003 741 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 DDR2Q16832 855 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 BTBD8Q5XKL5 378 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 USP53Q70EK8 1073 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 DHX32Q7L7V1 743 aaKnown RBP15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 SRRM1Q8IYB3 904 aaKnown RBP15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 FSIP1Q8NA03 581 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 HAS1Q92839 578 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 MYRFLQ96LU7 910 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 CCNL2Q96S94 520 aaPredicted RBP15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 NUP58Q9BVL2 599 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 MKRN2Q9H000 416 aaKnown RBP15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 C6orf106Q9H6K1 298 aaPredicted RBP15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 RPF1Q9H9Y2 349 aaKnown RBP15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 PTPRHQ9HD43 1115 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 OSGEPQ9NPF4 335 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 PCDHB6Q9Y5E3 794 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 PCDHB5Q9Y5E4 795 aa15.28■□□□□ 0.04
SYNCRIP-203ENST00000444272 PPEF2O14830 753 aa15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 GUCY2FP51841 1108 aa15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 RPL10AP62906 217 aaKnown RBP15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 SMARCB1Q12824 385 aa15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 CLN3Q13286 438 aa15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 SAFBQ15424 915 aaKnown RBP eCLIP15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 SLC10A6Q3KNW5 377 aa15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 FUT11Q495W5 492 aa15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 FAM124AQ86V42 546 aa15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 CACUL1Q86Y37 369 aa15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 ELF4Q99607 663 aaPredicted RBP15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 ACO2Q99798 780 aaKnown RBP15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 SMPD4Q9NXE4 827 aa15.27■□□□□ 0.04
SYNCRIP-203ENST00000444272 NUMA1Q14980 2115 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 PDZD2O15018 2839 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 PRPF3O43395 683 aaKnown RBP15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 PDE6CP51160 858 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 EFNA5P52803 228 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 C21orf59P57076 290 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 ORC1Q13415 861 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 SHBQ15464 509 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 SEZ6Q53EL9 994 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 SGF29Q96ES7 293 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 TCEANC2Q96MN5 208 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 TCHPQ9BT92 498 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 TMPRSS4Q9NRS4 437 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 NAP1L2Q9ULW6 460 aaPredicted RBP15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 CPQQ9Y646 472 aa15.26■□□□□ 0.03
SYNCRIP-203ENST00000444272 KLF18A0A0U1RQI7 1052 aa15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 MCF2P10911 925 aa15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 GRNP28799 593 aaKnown RBP15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 LILRA4P59901 499 aa15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 E2F1Q01094 437 aa15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 KIAA1958Q8N8K9 716 aa15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 SPATA20Q8TB22 786 aa15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 ZNF564Q8TBZ8 553 aaPredicted RBP15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 RUFY2Q8WXA3 655 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms