RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 PCSK1P29120 753 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 MAPK8P45983 427 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 SLC6A11P48066 632 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 LHX1P48742 406 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 IRX4P78413 519 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 SHC2P98077 582 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 OXLD1Q5BKU9 147 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 EMC10Q5UCC4 262 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 UNQ6494/PRO21346Q6UXR6 183 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 C4orf50Q6ZRC1 276 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 SV2BQ7L1I2 683 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 HS2ST1Q7LGA3 356 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 FILIP1Q7Z7B0 1213 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 NT5DC4Q86YG4 428 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 SFTPA1Q8IWL2 248 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 TMEFF1Q8IYR6 380 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 DEFB119Q8N690 84 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 TOP6BLQ8N6T0 577 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 LRRC52Q8N7C0 313 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 FRMD1Q8N878 549 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 DEFB124Q8NES8 71 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 MDGA1Q8NFP4 955 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 USP33Q8TEY7 942 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 LEO1Q8WVC0 666 aaPredicted RBP7.73□□□□□ -1.17
CASP4-202ENST00000417440 MYLPFQ96A32 169 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 HVCN1Q96D96 273 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 ERLEC1Q96DZ1 483 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 TRMT2BQ96GJ1 504 aaKnown RBP7.73□□□□□ -1.17
CASP4-202ENST00000417440 HPDLQ96IR7 371 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 ANKRD36BP1Q96IX9 119 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 MYRFLQ96LU7 910 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 CLIC6Q96NY7 704 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 PKMYT1Q99640 499 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 SYT15Q9BQS2 421 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 FGFBP2Q9BYJ0 223 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 ABCB6Q9NP58 842 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 TMEM9BQ9NQ34 198 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 TRPM5Q9NZQ8 1165 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 GCNT4Q9P109 453 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 BCCIPQ9P287 314 aaKnown RBP eCLIP7.73□□□□□ -1.17
CASP4-202ENST00000417440 EBF1Q9UH73 591 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 SIX4Q9UIU6 781 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 ITGA11Q9UKX5 1188 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 ZMIZ1Q9ULJ6 1067 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 CPQQ9Y646 472 aa7.73□□□□□ -1.17
CASP4-202ENST00000417440 KMT2BQ9UMN6 2715 aaPredicted RBP7.72□□□□□ -1.17
CASP4-202ENST00000417440 CFAP47Q6ZTR5 3102 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 LAMA1P25391 3075 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 J3QL48 77 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 GABRDO14764 452 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 ALDH1A2O94788 518 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 CLSTN1O94985 981 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 KLF8O95600 359 aaPredicted RBP7.72□□□□□ -1.17
CASP4-202ENST00000417440 LDHAP00338 332 aaKnown RBP7.72□□□□□ -1.17
CASP4-202ENST00000417440 TNNC2P02585 160 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 GAP43P17677 238 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 GARTP22102 1010 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 TXLNAP40222 546 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 OPRD1P41143 372 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 ZXDBP98169 803 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 POU5F1Q01860 360 aaKnown RBP7.72□□□□□ -1.17
CASP4-202ENST00000417440 KDSRQ06136 332 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 MYO1EQ12965 1108 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 NNTQ13423 1086 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 ELOAQ14241 798 aaKnown RBP7.72□□□□□ -1.17
CASP4-202ENST00000417440 C8orf34Q49A92 452 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 CFAP221Q4G0U5 840 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 MDH1BQ5I0G3 518 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 PMS2CLQ68D20 193 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 FAM173BQ6P4H8 233 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 FAM171BQ6P995 826 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 LPCAT2Q7L5N7 544 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 ALLCQ8N6M5 410 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 TXNDC5Q8NBS9 432 aaKnown RBP7.72□□□□□ -1.17
CASP4-202ENST00000417440 OR5B17Q8NGF7 314 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 OR6B3Q8NGW1 331 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 CCDC26Q8TAB7 109 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 SPATA18Q8TC71 538 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 HPS3Q969F9 1004 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 DNAJC19Q96DA6 116 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 STRA6Q9BX79 667 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 KLF16Q9BXK1 252 aaPredicted RBP7.72□□□□□ -1.17
CASP4-202ENST00000417440 RNF38Q9H0F5 515 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 SNX25Q9H3E2 840 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 CRTAC1Q9NQ79 661 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 FSCN3Q9NQT6 498 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 PANK4Q9NVE7 773 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 PGPEP1Q9NXJ5 209 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 GDAP2Q9NXN4 497 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 CFAP97Q9P2B7 532 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 SEL1LQ9UBV2 794 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 STK17AQ9UEE5 414 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 CDH9Q9ULB4 789 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 MMP17Q9ULZ9 603 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 ARHGAP26Q9UNA1 814 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.72□□□□□ -1.17
CASP4-202ENST00000417440 EPG5Q9HCE0 2579 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 PDCD11Q14690 1871 aaKnown RBP7.72□□□□□ -1.17
CASP4-202ENST00000417440 PTPRJQ12913 1337 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 ATXN2Q99700 1313 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms