RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 NR1I3Q14994 352 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 RAB41Q5JT25 222 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 CCDC186Q7Z3E2 898 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 CELF5Q8N6W0 485 aaKnown RBP24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 ST13P5Q8NFI4 369 aaPredicted RBP24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 DEPDC1BQ8WUY9 529 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 SLC35F5Q8WV83 523 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 EDAQ92838 391 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 SECISBP2LQ93073 1101 aaKnown RBP24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 HSFY1Q96LI6 401 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 RPP25Q9BUL9 199 aaKnown RBP24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 NLRC4Q9NPP4 1024 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 TDP1Q9NUW8 608 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 GMIPQ9P107 970 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 C5orf42Q9H799 3197 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 CKMP06732 381 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 FCARP24071 287 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 STAT1P42224 750 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 TKTL1P51854 596 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 HECTD3Q5T447 861 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 CACNA2D4Q7Z3S7 1137 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 MFSD6LQ8IWD5 586 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 ARHGAP18Q8N392 663 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 ARL14EPQ8N8R7 260 aaPredicted RBP24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 KIF9Q9HAQ2 790 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 ACP6Q9NPH0 428 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 DUSP12Q9UNI6 340 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 HCN4Q9Y3Q4 1203 aa24.32■■□□□ 1.48
SMARCB1-205ENST00000417137 C2orf78A6NCI8 922 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 HEPACAM2A8MVW5 462 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 TULP2O00295 520 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 TPM3P06753 285 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 ZDHHC11BP0C7U3 371 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 PNMA6AP0CW24 399 aaPredicted RBP24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 SRFP11831 508 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 PSMC3P17980 439 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 TUBP50607 506 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 ZNF268Q14587 947 aaPredicted RBP24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 SLC47A2Q86VL8 602 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 YAF2Q8IY57 180 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 SIX6OS1Q8N1H7 587 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 STK32AQ8WU08 396 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 KHSRPQ92945 711 aaKnown RBP eCLIP24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 CYP2S1Q96SQ9 504 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 TRMT61BQ9BVS5 477 aaKnown RBP24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 THG1LQ9NWX6 298 aaKnown RBP24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 PCDHGC3Q9UN70 934 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 CEP83Q9Y592 693 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 DOCK8Q8NF50 2099 aa24.31■■□□□ 1.48
SMARCB1-205ENST00000417137 EPHB6O15197 1021 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 ZBED1O96006 694 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 OAS1P00973 400 aaKnown RBP24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 SOX5P35711 763 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 GPD2P43304 727 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 ACADSBP45954 432 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 JAM2P57087 298 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 TMEM31Q5JXX7 168 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 PMF1Q6P1K2 205 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 DENND1BQ6P3S1 775 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 TADA2BQ86TJ2 420 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 GPIHBP1Q8IV16 184 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 FMNL3Q8IVF7 1028 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 LRFN3Q9BTN0 628 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 PLA2G2FQ9BZM2 168 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 PDCL3Q9H2J4 239 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 EPHX3Q9H6B9 360 aa24.3■■□□□ 1.48
SMARCB1-205ENST00000417137 RALAP11233 206 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 CYP11B1P15538 503 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 PFKPQ01813 784 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 PM20D1Q6GTS8 502 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 VITQ6UXI7 678 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 SCML4Q8N228 414 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 RNF214Q8ND24 703 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 BPIFB1Q8TDL5 484 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 USP13Q92995 863 aaPredicted RBP24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 NOX5Q96PH1 765 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 CDK5RAP1Q96SZ6 601 aaKnown RBP24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 ANP32EQ9BTT0 268 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 NACA2Q9H009 215 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 SMG9Q9H0W8 520 aaKnown RBP24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 LHX5Q9H2C1 402 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 CNGB3Q9NQW8 809 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 SLC2A4RGQ9NR83 387 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 NAGPAQ9UK23 515 aa24.29■■□□□ 1.48
SMARCB1-205ENST00000417137 GFPT2O94808 682 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 FBXO21O94952 628 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 PRAMEF12O95522 483 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 CCDC172P0C7W6 258 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 LCP1P13796 627 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 RGS7P49802 495 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 SNX16P57768 344 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 GPC5P78333 572 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 SLC7A9P82251 487 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 SIGLEC14Q08ET2 396 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 ADIGQ0VDE8 80 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 SLC22A12Q96S37 553 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 NUP58Q9BVL2 599 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 ULBP1Q9BZM6 244 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 CYLDQ9NQC7 956 aa24.28■■□□□ 1.48
SMARCB1-205ENST00000417137 ST7Q9NRC1 585 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms