RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 KLF18A0A0U1RQI7 1052 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 M0QZQ0 153 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 SGSM2O43147 1006 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 SLC37A4O43826 429 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 USO1O60763 962 aaKnown RBP6.87□□□□□ -1.31
LINC00396-201ENST00000411690 KRT38O76015 456 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 LARGE1O95461 756 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 APODP05090 189 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 EDN1P05305 212 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 KRT10P13645 584 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 KCNE1P15382 129 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 GABRG2P18507 467 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 CHMLP26374 656 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 ACTN2P35609 894 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 GATA4P43694 442 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 RARRES1P49788 294 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 TMPRSS3P57727 454 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 DMP1Q13316 513 aaPredicted RBP6.87□□□□□ -1.31
LINC00396-201ENST00000411690 ZNF77Q15935 545 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 HLA-BQ31612 363 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 BROXQ5VW32 411 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 ZNF574Q6ZN55 896 aaPredicted RBP6.87□□□□□ -1.31
LINC00396-201ENST00000411690 SFTPA1Q8IWL2 248 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 CEP120Q8N960 986 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 DEPTORQ8TB45 409 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 ACAP3Q96P50 834 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 NACC1Q96RE7 527 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 PNKPQ96T60 521 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 LGMNQ99538 433 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 FAM117AQ9C073 453 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 CCDC113Q9H0I3 377 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 KCNMB3Q9NPA1 279 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 ZDHHC4Q9NPG8 344 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 VPS54Q9P1Q0 977 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 HCN2Q9UL51 889 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 CYP8B1Q9UNU6 501 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 BTBD3Q9Y2F9 522 aa6.87□□□□□ -1.31
LINC00396-201ENST00000411690 FNDC3AQ9Y2H6 1198 aaKnown RBP6.87□□□□□ -1.31
LINC00396-201ENST00000411690 GOLGA4Q13439 2230 aaKnown RBP6.86□□□□□ -1.31
LINC00396-201ENST00000411690 TRIP11Q15643 1979 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 NID2Q14112 1375 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 PTPRQQ9UMZ3 2332 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 SLC27A2O14975 620 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 KAT7O95251 611 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 LYPLA2O95372 231 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 CKMP06732 381 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 FBXO45P0C2W1 286 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 USP17L7P0C7H9 530 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 ATP2B1P20020 1258 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 MSX1P28360 303 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 KIR2DL1P43626 348 aaPredicted RBP6.86□□□□□ -1.31
LINC00396-201ENST00000411690 SLC6A11P48066 632 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 CDR1P51861 262 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 RCAN1P53805 252 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 UCNP55089 124 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 CENPCQ03188 943 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 USP4Q13107 963 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 TARDBPQ13148 414 aaKnown RBP eCLIP6.86□□□□□ -1.31
LINC00396-201ENST00000411690 LBRQ14739 615 aaKnown RBP6.86□□□□□ -1.31
LINC00396-201ENST00000411690 C4orf17Q53FE4 359 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 NT5DC1Q5TFE4 455 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 OVOS1Q6IE37 1185 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 DSTYKQ6XUX3 929 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 SMC5Q8IY18 1101 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 ZCCHC9Q8N567 271 aaKnown RBP6.86□□□□□ -1.31
LINC00396-201ENST00000411690 MCPH1Q8NEM0 835 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 SH3RF2Q8TEC5 729 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 PIGOQ8TEQ8 1089 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 TTC9Q92623 222 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 TCEANC2Q96MN5 208 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 YTHDC1Q96MU7 727 aaKnown RBP6.86□□□□□ -1.31
LINC00396-201ENST00000411690 CYP2S1Q96SQ9 504 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 EIF2AK1Q9BQI3 630 aaKnown RBP6.86□□□□□ -1.31
LINC00396-201ENST00000411690 ESYT1Q9BSJ8 1104 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 MIR1-1HGQ9H1L0 117 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 CPNE5Q9HCH3 593 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 TRPC7Q9HCX4 862 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 SH3GLB2Q9NR46 395 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 CNTN3Q9P232 1028 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 PCDHA4Q9UN74 947 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 MAGED2Q9UNF1 606 aaPredicted RBP6.86□□□□□ -1.31
LINC00396-201ENST00000411690 SRPK3Q9UPE1 567 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 TNFSF13BQ9Y275 285 aa6.86□□□□□ -1.31
LINC00396-201ENST00000411690 A0A087WWV3 80 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 A0A0A0MRY4 1105 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 TRAV19A0A0A6YYK7 116 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 MEI4A8MW99 385 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 BCAT2O15382 392 aaPredicted RBP6.85□□□□□ -1.31
LINC00396-201ENST00000411690 BRINP1O60477 761 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 ARAFP10398 606 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 CDK4P11802 303 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 HMGA1P17096 107 aaKnown RBP6.85□□□□□ -1.31
LINC00396-201ENST00000411690 TYMPP19971 482 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 EIF2DP41214 584 aaKnown RBP6.85□□□□□ -1.31
LINC00396-201ENST00000411690 GRIA2P42262 883 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 GRK6P43250 576 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 TNFRSF4P43489 277 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 NAMPTP43490 491 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 CCR10P46092 362 aa6.85□□□□□ -1.31
LINC00396-201ENST00000411690 CLDN6P56747 220 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms