RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 COPAP53621 1224 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 TRAP1Q12931 704 aaKnown RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 GRB14Q14449 540 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 TAF1CQ15572 869 aaPredicted RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 NEDD8Q15843 81 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 HIST3H2AQ7L7L0 130 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 HIST1H2ACQ93077 130 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 PIM2Q9P1W9 311 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 TUBGCP4Q9UGJ1 667 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 ECE2O60344 883 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 CCNT2O60583 730 aaKnown RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 RBP5P82980 135 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 AGGF1Q8N302 714 aaeCLIP12.72□□□□□ -0.37
SMU1-201ENST00000397149 TRPV3Q8NET8 790 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 SEMA4DQ92854 862 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 USP13Q92995 863 aaPredicted RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 FAM120BQ96EK7 910 aaKnown RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 PNMA5Q96PV4 448 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 MORC2Q9Y6X9 1032 aaPredicted RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 ZNF839A8K0R7 811 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 BBOX1O75936 387 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 SLC2A4P14672 509 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 TGM2P21980 687 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 EPHB2P29323 1055 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 TGM3Q08188 693 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 ZMYM1Q5SVZ6 1142 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 TMEM26Q6ZUK4 368 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 MARK2Q7KZI7 788 aaKnown RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 DAW1Q8N136 415 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 DCAF4Q8WV16 495 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 SLC9A6Q92581 669 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 KCTD14Q9BQ13 255 aaPredicted RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 DCUN1D5Q9BTE7 237 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 MCUBQ9NWR8 336 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 MARK1Q9P0L2 795 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 SMCO3A2RU48 225 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 LGALS16A8MUM7 142 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 RTN2O75298 545 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 CCDC166P0CW27 439 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 STAT5BP51692 787 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 MARSP56192 900 aaKnown RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 PRKAA1Q13131 559 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 ORC1Q13415 861 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 KYNUQ16719 465 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 CBWD2Q8IUF1 395 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 HASPINQ8TF76 798 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 NSL1Q96IY1 281 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 ALKBH4Q9NXW9 302 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 GRID1Q9ULK0 1009 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 TRPC5OSA6NMA1 111 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 H3BMM5 538 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 IGF2BP3O00425 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMU1-201ENST00000397149 MYL12BO14950 172 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 SEMA3DO95025 777 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 IFNA16P05015 189 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 S100A6P06703 90 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 PRKAG1P54619 331 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 ARID3BQ8IVW6 561 aaPredicted RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 SLC35G2Q8TBE7 412 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 VPS33AQ96AX1 596 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 ZNF112Q9UJU3 913 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 SMG5Q9UPR3 1016 aaKnown RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 CCNG1P51959 295 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 PODNQ7Z5L7 613 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 LRRC1Q9BTT6 524 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 SPEF1Q9Y4P9 236 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 DBIP07108 87 aaKnown RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 PABPC1P11940 636 aaKnown RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 TERF2Q15554 542 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 ARL6IP4Q66PJ3 421 aaKnown RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 FOXP4Q8IVH2 680 aaPredicted RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 HPS3Q969F9 1004 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 PRRG4Q9BZD6 226 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 GOLPH3Q9H4A6 298 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 RIBC2Q9H4K1 309 aa12.72□□□□□ -0.37
SMU1-201ENST00000397149 MTO1Q9Y2Z2 717 aaKnown RBP12.72□□□□□ -0.37
SMU1-201ENST00000397149 BCLAF3A2AJT9 711 aaKnown RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 SNRPAP09012 282 aaKnown RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 AGAP9Q5VTM2 703 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 IER5Q5VY09 327 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 AKAP7Q9P0M2 348 aaPredicted RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 PLA2G6O60733 806 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 ARSJQ5FYB0 599 aaPredicted RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 APOL2Q9BQE5 337 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 UBE2OQ9C0C9 1292 aaKnown RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 CLPBQ9H078 707 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 WDCPQ9H6R7 721 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 ACAD9Q9H845 621 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 SOHLH2Q9NX45 425 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 NEDD4P46934 1319 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 MMP10P09238 476 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 S100GP29377 79 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 DHX34Q14147 1143 aaKnown RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 RNASE12Q5GAN4 147 aaKnown RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 GALNTL5Q7Z4T8 443 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 CAPSLQ8WWF8 208 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 EXOC2Q96KP1 924 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 MRGBPQ9NV56 204 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms