RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 NMUR2Q9GZQ4 415 aa16.77■□□□□ 0.28
PCDH1-203ENST00000394536 C2orf40Q9H1Z8 148 aa16.77■□□□□ 0.28
PCDH1-203ENST00000394536 EBF2Q9HAK2 575 aa16.77■□□□□ 0.28
PCDH1-203ENST00000394536 TLK1Q9UKI8 766 aa16.77■□□□□ 0.28
PCDH1-203ENST00000394536 DOCK2Q92608 1830 aa16.77■□□□□ 0.28
PCDH1-203ENST00000394536 ANKRD36CQ5JPF3 1778 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 TCRBV7S3A2A0A539 114 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 CYB561D2O14569 222 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 DGKIO75912 1065 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 SKIV2L2P42285 1042 aaKnown RBP16.77■□□□□ 0.27
PCDH1-203ENST00000394536 SLC34A1Q06495 639 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 CAPSQ13938 189 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 DENND5BQ6ZUT9 1274 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 EFCAB3Q8N7B9 438 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 APOPT1Q96IL0 206 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 ARHGAP28Q9P2N2 729 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 DNAJC16Q9Y2G8 782 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 PTPRJQ12913 1337 aa16.77■□□□□ 0.27
PCDH1-203ENST00000394536 AIM2O14862 343 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 LRCH4O75427 683 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 ASS1P00966 412 aaKnown RBP16.76■□□□□ 0.27
PCDH1-203ENST00000394536 SLC12A2P55011 1212 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 FKBP1AP62942 108 aaKnown RBP16.76■□□□□ 0.27
PCDH1-203ENST00000394536 GLRA4Q5JXX5 417 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 IER5Q5VY09 327 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 CCNYL1Q8N7R7 359 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 SNX25Q9H3E2 840 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 PAPOLBQ9NRJ5 636 aaKnown RBP16.76■□□□□ 0.27
PCDH1-203ENST00000394536 PACSIN3Q9UKS6 424 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 HMGCRP04035 888 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 TXNP10599 105 aaKnown RBP16.76■□□□□ 0.27
PCDH1-203ENST00000394536 EIF4BP23588 611 aaKnown RBP16.76■□□□□ 0.27
PCDH1-203ENST00000394536 MGAT5Q09328 741 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 FAM47CQ5HY64 1035 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 POLNQ7Z5Q5 900 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 ST13P4Q8IZP2 240 aaPredicted RBP16.76■□□□□ 0.27
PCDH1-203ENST00000394536 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 SLCO2A1Q92959 643 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 LRRC4Q9HBW1 653 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 ZNF536O15090 1300 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 ZNF541Q9H0D2 1346 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 EME2A4GXA9 379 aaPredicted RBP16.76■□□□□ 0.27
PCDH1-203ENST00000394536 APOC4-APOC2K7ER74 178 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 PDE5AO76074 875 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 APOC2P02655 101 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 PHKA2P46019 1235 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 GMPSP49915 693 aaPredicted RBP16.76■□□□□ 0.27
PCDH1-203ENST00000394536 CACNA2D1P54289 1103 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 OGDHQ02218 1023 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 PARP6Q2NL67 630 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 MSS51Q4VC12 460 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 CPB2Q96IY4 423 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 CPXM1Q96SM3 734 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 SAR1AQ9NR31 198 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 PIM2Q9P1W9 311 aa16.76■□□□□ 0.27
PCDH1-203ENST00000394536 ZBTB7AO95365 584 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 ATP4AP20648 1035 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 WNT7BP56706 349 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 MMEL1Q495T6 779 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 SH3GL3Q99963 347 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 CNPY3Q9BT09 278 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 NT5C1AQ9BXI3 368 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 MAP3K20Q9NYL2 800 aaKnown RBP16.75■□□□□ 0.27
PCDH1-203ENST00000394536 RABGEF1Q9UJ41 708 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 SYNPO2Q9UMS6 1093 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 DPPA5A6NC42 116 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 PRPF4O43172 522 aaKnown RBP eCLIP16.75■□□□□ 0.27
PCDH1-203ENST00000394536 B4GALT5O43286 388 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 TPBGLP0DKB5 382 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 ZBTB48P10074 688 aaPredicted RBP16.75■□□□□ 0.27
PCDH1-203ENST00000394536 TGFB2P61812 414 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 TMEM132DQ14C87 1099 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 GOLGA7BQ2TAP0 167 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 BBS12Q6ZW61 710 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 CDKL3Q8IVW4 592 aaPredicted RBP16.75■□□□□ 0.27
PCDH1-203ENST00000394536 OTUD5Q96G74 571 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 L3MBTL3Q96JM7 780 aaPredicted RBP16.75■□□□□ 0.27
PCDH1-203ENST00000394536 NMRK1Q9NWW6 199 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 E5RJQ4 531 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 GSC2O15499 205 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 GRIN3BO60391 1043 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 PSMG1O95456 288 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 TCN1P20061 433 aaPredicted RBP16.75■□□□□ 0.27
PCDH1-203ENST00000394536 KLRC2P26717 231 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 ABCG1P45844 678 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 ART3Q13508 389 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 DALRD3Q5D0E6 543 aaKnown RBP16.75■□□□□ 0.27
PCDH1-203ENST00000394536 CATSPER4Q7RTX7 472 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 KDELC2Q7Z4H8 507 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 RNF169Q8NCN4 708 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 AGBL3Q8NEM8 1001 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 TMEM176AQ96HP8 235 aa16.75■□□□□ 0.27
PCDH1-203ENST00000394536 NTPCRQ9BSD7 190 aaKnown RBP16.75■□□□□ 0.27
PCDH1-203ENST00000394536 SIGLEC16A6NMB1 481 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 SPAG6O75602 509 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 TMEM63AO94886 807 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 COG7P83436 770 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 DNAL1Q4LDG9 190 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 ZC3H12AQ5D1E8 599 aaKnown RBP16.74■□□□□ 0.27
PCDH1-203ENST00000394536 LRRC38Q5VT99 294 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms