RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SPOCD1Q6ZMY3 1216 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 ECHDC2Q86YB7 292 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 CCDC13Q8IYE1 715 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 TXLNGYQ9BZA5 131 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 HOMER3Q9NSC5 361 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 PCSK1NQ9UHG2 260 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 TIMM13Q9Y5L4 95 aaPredicted RBP20.34■□□□□ 0.85
SSU72-204ENST00000378726 LRRD1A4D1F6 860 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 MIPP30301 263 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 ADCY2Q08462 1091 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 MBTPS1Q14703 1052 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 SMTNL2Q2TAL5 461 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 TRNP1Q6NT89 227 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 RTN4RL1Q86UN2 441 aaPredicted RBP20.34■□□□□ 0.85
SSU72-204ENST00000378726 KHSRPQ92945 711 aaKnown RBP eCLIP20.34■□□□□ 0.85
SSU72-204ENST00000378726 CNPY3Q9BT09 278 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 DDX43Q9NXZ2 648 aaKnown RBP20.34■□□□□ 0.85
SSU72-204ENST00000378726 INPP5FQ9Y2H2 1132 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 PPFIA2O75334 1257 aa20.33■□□□□ 0.85
SSU72-204ENST00000378726 ECEL1O95672 775 aa20.33■□□□□ 0.85
SSU72-204ENST00000378726 BYSLQ13895 437 aaKnown RBP20.33■□□□□ 0.85
SSU72-204ENST00000378726 SPRED3Q2MJR0 410 aa20.33■□□□□ 0.85
SSU72-204ENST00000378726 SH3PXD2AQ5TCZ1 1133 aa20.33■□□□□ 0.85
SSU72-204ENST00000378726 ZDHHC17Q8IUH5 632 aa20.33■□□□□ 0.85
SSU72-204ENST00000378726 HNRNPABQ99729 332 aaKnown RBP20.33■□□□□ 0.85
SSU72-204ENST00000378726 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.33■□□□□ 0.85
SSU72-204ENST00000378726 RGS18Q9NS28 235 aa20.33■□□□□ 0.85
SSU72-204ENST00000378726 SAGE1Q9NXZ1 904 aa20.33■□□□□ 0.85
SSU72-204ENST00000378726 PHF24Q9UPV7 400 aa20.33■□□□□ 0.85
SSU72-204ENST00000378726 KBTBD13C9JR72 458 aa20.33■□□□□ 0.84
SSU72-204ENST00000378726 TJP3O95049 919 aa20.33■□□□□ 0.84
SSU72-204ENST00000378726 TKTP29401 623 aaKnown RBP20.33■□□□□ 0.84
SSU72-204ENST00000378726 LHX1P48742 406 aa20.33■□□□□ 0.84
SSU72-204ENST00000378726 CCNG2Q16589 344 aa20.33■□□□□ 0.84
SSU72-204ENST00000378726 CCDC91Q7Z6B0 441 aa20.33■□□□□ 0.84
SSU72-204ENST00000378726 FUKQ8N0W3 1084 aa20.33■□□□□ 0.84
SSU72-204ENST00000378726 TMEM86AQ8N2M4 240 aa20.33■□□□□ 0.84
SSU72-204ENST00000378726 SEC16BQ96JE7 1060 aa20.33■□□□□ 0.84
SSU72-204ENST00000378726 FMO2Q99518 471 aa20.33■□□□□ 0.84
SSU72-204ENST00000378726 LCP1P13796 627 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 PPP1R7Q15435 360 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 CCDC142Q17RM4 750 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 C15orf59Q2T9L4 293 aaPredicted RBP20.32■□□□□ 0.84
SSU72-204ENST00000378726 TIGD5Q53EQ6 642 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 TFDP3Q5H9I0 405 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 KIAA0319Q5VV43 1072 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 CCDC121Q6ZUS5 278 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 ZNF598Q86UK7 904 aaKnown RBP20.32■□□□□ 0.84
SSU72-204ENST00000378726 ATL2Q8NHH9 583 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 MDM1Q8TC05 714 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 HSFY1Q96LI6 401 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 FAM118BQ9BPY3 351 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 USP18Q9UMW8 372 aa20.32■□□□□ 0.84
SSU72-204ENST00000378726 C5orf60A6NFR6 353 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 CLDN5O00501 218 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 B3GAT3O94766 335 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 TRUB2O95900 331 aaKnown RBP20.31■□□□□ 0.84
SSU72-204ENST00000378726 SHBGP04278 402 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 YY1P25490 414 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 PCK1P35558 622 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 CDKN2BP42772 138 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 RPL34P49207 117 aaKnown RBP20.31■□□□□ 0.84
SSU72-204ENST00000378726 CDR1P51861 262 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 IFFO1Q0D2I5 559 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 CCDC14Q49A88 953 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 SLCO2A1Q92959 643 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 TLCD1Q96CP7 247 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 CFAP57Q96MR6 1250 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 DUSP16Q9BY84 665 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 EPB41L4BQ9H329 900 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 ZDHHC18Q9NUE0 388 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 hCG_1818297A0A087WSY0 165 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 MYCP01106 439 aaPredicted RBP20.31■□□□□ 0.84
SSU72-204ENST00000378726 KDELR1P24390 212 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 RPL21P46778 160 aaKnown RBP20.31■□□□□ 0.84
SSU72-204ENST00000378726 PLTPP55058 493 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 SLC8A3P57103 927 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 GRIK3Q13003 919 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 PAQR9Q6ZVX9 377 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 CYLDQ9NQC7 956 aa20.31■□□□□ 0.84
SSU72-204ENST00000378726 C3orf70A6NLC5 250 aaPredicted RBP20.3■□□□□ 0.84
SSU72-204ENST00000378726 PTPN7P35236 360 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 ACADSBP45954 432 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 ATP11AP98196 1134 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 CDO1Q16878 200 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 PAN2Q504Q3 1202 aaKnown RBP20.3■□□□□ 0.84
SSU72-204ENST00000378726 MDH1BQ5I0G3 518 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 SLC24A5Q71RS6 500 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 KCTD6Q8NC69 237 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 GRK7Q8WTQ7 553 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 CLEC4CQ8WTT0 213 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 UNC93B1Q9H1C4 597 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 C9IYK1 514 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 I3L4J1 428 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 DNM1LO00429 736 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 XPO1O14980 1071 aaKnown RBP20.3■□□□□ 0.84
SSU72-204ENST00000378726 RASSF9O75901 435 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 EOMESO95936 686 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 SDC4P31431 198 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 CDK7P50613 346 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms