RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 MAGEA11P43364 429 aa25.03■■□□□ 1.6
SNX3-203ENST00000368979 PTPN9P43378 593 aa25.03■■□□□ 1.6
SNX3-203ENST00000368979 SMARCB1Q12824 385 aa25.03■■□□□ 1.6
SNX3-203ENST00000368979 SEL1L2Q5TEA6 688 aa25.03■■□□□ 1.6
SNX3-203ENST00000368979 AADACL2Q6P093 401 aa25.03■■□□□ 1.6
SNX3-203ENST00000368979 VSTM1Q6UX27 236 aa25.03■■□□□ 1.6
SNX3-203ENST00000368979 POLNQ7Z5Q5 900 aa25.03■■□□□ 1.6
SNX3-203ENST00000368979 NDRG1Q92597 394 aaKnown RBP25.03■■□□□ 1.6
SNX3-203ENST00000368979 SLC9A7Q96T83 725 aa25.03■■□□□ 1.6
SNX3-203ENST00000368979 C11orf84Q9BUA3 381 aaPredicted RBP25.03■■□□□ 1.6
SNX3-203ENST00000368979 ZMYND8Q9ULU4 1186 aaPredicted RBP25.03■■□□□ 1.6
SNX3-203ENST00000368979 MTMR11A4FU01 709 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 SART1O43290 800 aaKnown RBP25.02■■□□□ 1.6
SNX3-203ENST00000368979 RNF8O76064 485 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 PCK1P35558 622 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 GRIK1P39086 918 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 C2orf54Q08AI8 447 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 NAA30Q147X3 362 aaPredicted RBP25.02■■□□□ 1.6
SNX3-203ENST00000368979 PSMD5Q16401 504 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 C15orf59Q2T9L4 293 aaPredicted RBP25.02■■□□□ 1.6
SNX3-203ENST00000368979 SLC8B1Q6J4K2 584 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 BHLHA9Q7RTU4 235 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 NOA1Q8NC60 698 aaKnown RBP25.02■■□□□ 1.6
SNX3-203ENST00000368979 RIN2Q8WYP3 895 aaPredicted RBP25.02■■□□□ 1.6
SNX3-203ENST00000368979 DDX23Q9BUQ8 820 aaKnown RBP25.02■■□□□ 1.6
SNX3-203ENST00000368979 USP3Q9Y6I4 520 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 TNFRSF10BO14763 440 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 FGGP02679 453 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 PPM1AP35813 382 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 TUBB4BP68371 445 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 DSG1Q02413 1049 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 CLUL1Q15846 466 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 ERCC6LQ2NKX8 1250 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 TEX35Q5T0J7 233 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 SH3PXD2AQ5TCZ1 1133 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 TXNRD3NBQ6F5E7 133 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 PM20D1Q6GTS8 502 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 DDX53Q86TM3 631 aaKnown RBP25.02■■□□□ 1.6
SNX3-203ENST00000368979 FIBCD1Q8N539 461 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 FBXO22Q8NEZ5 403 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 PHOSPHO2Q8TCD6 241 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 SPPL2BQ8TCT7 592 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 IRGQQ8WZA9 623 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 UBXN4Q92575 508 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 C8orf48Q96LL4 319 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 PGLYRP2Q96PD5 576 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 SLC2A13Q96QE2 648 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 PLVAPQ9BX97 442 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 AAASQ9NRG9 546 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.02■■□□□ 1.6
SNX3-203ENST00000368979 INSL6Q9Y581 213 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 CDY1Q9Y6F8 540 aa25.02■■□□□ 1.6
SNX3-203ENST00000368979 TRIM66O15016 1216 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 VNN2O95498 520 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 ZBED1O96006 694 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 USP17L7P0C7H9 530 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 IL1R2P27930 398 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 MIPP30301 263 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 GJC1P36383 396 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 MATKP42679 507 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 RGS19P49795 217 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 ARPP19P56211 112 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 YWHAZP63104 245 aaKnown RBP25.01■■□□□ 1.59
SNX3-203ENST00000368979 HADHQ16836 314 aaKnown RBP25.01■■□□□ 1.59
SNX3-203ENST00000368979 HERC6Q8IVU3 1022 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 ATAD1Q8NBU5 361 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 EXD1Q8NHP7 514 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 SP7Q8TDD2 431 aaPredicted RBP25.01■■□□□ 1.59
SNX3-203ENST00000368979 C2orf15Q8WU43 125 aaKnown RBP25.01■■□□□ 1.59
SNX3-203ENST00000368979 FAM149B1Q96BN6 582 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 RBM12Q9NTZ6 932 aaKnown RBP25.01■■□□□ 1.59
SNX3-203ENST00000368979 SLC4A7Q9Y6M7 1214 aa25.01■■□□□ 1.59
SNX3-203ENST00000368979 GLUD2P49448 558 aa25■■□□□ 1.59
SNX3-203ENST00000368979 SLC5A3P53794 718 aa25■■□□□ 1.59
SNX3-203ENST00000368979 LONRF2Q1L5Z9 754 aa25■■□□□ 1.59
SNX3-203ENST00000368979 ATP13A4Q4VNC1 1196 aa25■■□□□ 1.59
SNX3-203ENST00000368979 RNF19BQ6ZMZ0 732 aa25■■□□□ 1.59
SNX3-203ENST00000368979 HFE2Q6ZVN8 426 aa25■■□□□ 1.59
SNX3-203ENST00000368979 DEFB106AQ8N104 65 aa25■■□□□ 1.59
SNX3-203ENST00000368979 MMGT1Q8N4V1 131 aa25■■□□□ 1.59
SNX3-203ENST00000368979 FAM172AQ8WUF8 416 aa25■■□□□ 1.59
SNX3-203ENST00000368979 CENPIQ92674 756 aaPredicted RBP25■■□□□ 1.59
SNX3-203ENST00000368979 CLP1Q92989 425 aaKnown RBP25■■□□□ 1.59
SNX3-203ENST00000368979 NAP1L3Q99457 506 aaPredicted RBP25■■□□□ 1.59
SNX3-203ENST00000368979 ZBED2Q9BTP6 218 aa25■■□□□ 1.59
SNX3-203ENST00000368979 POPDC2Q9HBU9 364 aa25■■□□□ 1.59
SNX3-203ENST00000368979 DDX56Q9NY93 547 aaKnown RBP25■■□□□ 1.59
SNX3-203ENST00000368979 YJEFN3A6XGL0 299 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 E7ENQ6 273 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 ADAM12O43184 909 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 KRT7P08729 469 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 DESP17661 470 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 ATP11AP98196 1134 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 MLLT1Q03111 559 aaPredicted RBP24.99■■□□□ 1.59
SNX3-203ENST00000368979 CDO1Q16878 200 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 RAB6CQ53S08 254 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 KIAA1841Q6NSI8 718 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 SCN4BQ8IWT1 228 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 NCAPGQ9BPX3 1015 aa24.99■■□□□ 1.59
SNX3-203ENST00000368979 RAB6CQ9H0N0 254 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms