RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 CYP4A22Q5TCH4 519 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 PTAR1Q7Z6K3 402 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-201ENST00000361716 VPS11Q9H270 941 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 CYLDQ9NQC7 956 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 IQANK1A0A1B0GTG1 560 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 F8W8V4 182 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 EIF3DO15371 548 aaKnown RBP eCLIP13.2□□□□□ -0.3
VAMP1-201ENST00000361716 MAGEC1O60732 1142 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 KRT19P08727 400 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 TCF4P15884 667 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 YWHABP31946 246 aaKnown RBP13.2□□□□□ -0.3
VAMP1-201ENST00000361716 GPX6P59796 221 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 JAG1P78504 1218 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 ZNF568Q3ZCX4 644 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 MTERF2Q49AM1 385 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 MSS51Q4VC12 460 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 SLC27A3Q5K4L6 730 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 FNBP1LQ5T0N5 605 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 MAP3K21Q5TCX8 1036 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 FAXCQ5TGI0 409 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 MFSD7Q6UXD7 560 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 LPCAT2Q7L5N7 544 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 ANKS1BQ7Z6G8 1248 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 ZBTB33Q86T24 672 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 PDIK1LQ8N165 341 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 LRRC43Q8N309 656 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 NCSTNQ92542 709 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 SRPK1Q96SB4 655 aaKnown RBP13.2□□□□□ -0.3
VAMP1-201ENST00000361716 RAVER2Q9HCJ3 691 aaKnown RBP13.2□□□□□ -0.3
VAMP1-201ENST00000361716 XPNPEP1Q9NQW7 623 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 A0A1B0GTW7 788 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 PDLIM1O00151 329 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 STRNO43815 780 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 SEC24DO94855 1032 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-201ENST00000361716 ZFXP17010 805 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-201ENST00000361716 SLC1A1P43005 524 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 ENTPD1P49961 510 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 NFX1Q12986 1120 aaKnown RBP13.2□□□□□ -0.3
VAMP1-201ENST00000361716 ACAD10Q6JQN1 1059 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 LDHDQ86WU2 507 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 METTL25Q8N6Q8 603 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 ZNF398Q8TD17 642 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 GAB3Q8WWW8 586 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 MCEEQ96PE7 176 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 SYT11Q9BT88 431 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 NDUFA13Q9P0J0 144 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 SEPT9Q9UHD8 586 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-201ENST00000361716 AP4B1Q9Y6B7 739 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 MAD1L1Q9Y6D9 718 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 TAF1LQ8IZX4 1826 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 ROBO3Q96MS0 1386 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 AVILO75366 819 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 TFAP2AP05549 437 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 FDFT1P37268 417 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 RPL7AP62424 266 aaKnown RBP13.19□□□□□ -0.3
VAMP1-201ENST00000361716 C6orf183Q5T699 404 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 MROH9Q5TGP6 573 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 C16orf87Q6PH81 154 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 FOXR2Q6PJQ5 311 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 TMC7Q7Z402 723 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 IL31RAQ8NI17 732 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 HSPH1Q92598 858 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 DCUN1D1Q96GG9 259 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 NXF1Q9UBU9 619 aaKnown RBP13.19□□□□□ -0.3
VAMP1-201ENST00000361716 APOBEC2Q9Y235 224 aaKnown RBP13.19□□□□□ -0.3
VAMP1-201ENST00000361716 HEY1Q9Y5J3 304 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 FGFR3P22607 806 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 GNA15P30679 374 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 RAP1GDS1P52306 607 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 COPAP53621 1224 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 HDAC4P56524 1084 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 SEPT6Q14141 434 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 CDO1Q16878 200 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 KRT80Q6KB66 452 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 TMEM110Q86TL2 294 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 CDR2LQ86X02 465 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-201ENST00000361716 USP13Q92995 863 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-201ENST00000361716 TMIGD2Q96BF3 282 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 COA1Q9GZY4 146 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 BRD8Q9H0E9 1235 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 TUFT1Q9NNX1 390 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 RRN3Q9NYV6 651 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 TUBGCP4Q9UGJ1 667 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 SLC24A2Q9UI40 661 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 HERC5Q9UII4 1024 aaKnown RBP13.19□□□□□ -0.3
VAMP1-201ENST00000361716 RABGEF1Q9UJ41 708 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 GMEB1Q9Y692 573 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 NFIBO00712 420 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 TBX3O15119 743 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 CYP1A2P05177 515 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 IL1R1P14778 569 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 CENPCQ03188 943 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 LMNB2Q03252 620 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 MTMR1Q13613 665 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 KRT72Q14CN4 511 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 KLHL38Q2WGJ6 581 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 VWA5B1Q5TIE3 1220 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 C16orf46Q6P387 395 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 SCYL2Q6P3W7 929 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms