RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 RUFY1Q96T51 708 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 TBCBQ99426 244 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 DDX23Q9BUQ8 820 aaKnown RBP7.25□□□□□ -1.25
TRIM55-203ENST00000350034 DUSP16Q9BY84 665 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 RAB6CQ9H0N0 254 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 TSPYL1Q9H0U9 437 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 ZWILCHQ9H900 591 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 RSAD1Q9HA92 442 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 GOLGA6AQ9NYA3 693 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 ASIC3Q9UHC3 531 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 DNPEPQ9ULA0 475 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 ATP8A1Q9Y2Q0 1164 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 TRIP12Q14669 1992 aaPredicted RBP7.25□□□□□ -1.25
TRIM55-203ENST00000350034 APOC4-APOC2K7ER74 178 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 DNALI1O14645 258 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-203ENST00000350034 MDM4O15151 490 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 CST8O60676 142 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 SHOX2O60902 331 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-203ENST00000350034 ATP2C2O75185 946 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 APOC2P02655 101 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 CYP11A1P05108 521 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 CD48P09326 243 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 GHRP10912 638 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 IL4RP24394 825 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 ADORA2BP29275 332 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 SDC4P31431 198 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 CHKAP35790 457 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 MAP2K2P36507 400 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 ADCY8P40145 1251 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 LHX1P48742 406 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 SCNN1GP51170 649 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 CLCNKBP51801 687 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 ITGA8P53708 1063 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 PRMT2P55345 433 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 HDAC4P56524 1084 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 FAM189BP81408 668 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 CBLBQ13191 982 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 UPP1Q16831 310 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 C15orf59Q2T9L4 293 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-203ENST00000350034 SMTNL2Q2TAL5 461 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 TNFAIP8L3Q5GJ75 292 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 KCNT1Q5JUK3 1230 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 KDM7AQ6ZMT4 941 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 ZNF365Q70YC5 407 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 PIGZQ86VD9 579 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 ECHDC2Q86YB7 292 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 SCUBE3Q8IX30 993 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 GLIS1Q8NBF1 620 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 KCTD6Q8NC69 237 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 C3orf58Q8NDZ4 430 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 OR2W6PQ8NHA6 318 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 ACTL9Q8TC94 416 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 UBLCP1Q8WVY7 318 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-203ENST00000350034 TLCD1Q96CP7 247 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 PGBD4Q96DM1 585 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 CCDC114Q96M63 670 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 CFAP57Q96MR6 1250 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 FAM118BQ9BPY3 351 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 B3GNT5Q9BYG0 378 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 ADAM33Q9BZ11 813 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 ADAM7Q9H2U9 754 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 SEMA4AQ9H3S1 761 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 PCDH9Q9HC56 1237 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 UBN1Q9NPG3 1134 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 CRTAC1Q9NQ79 661 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 TRMT13Q9NUP7 481 aaKnown RBP7.24□□□□□ -1.25
TRIM55-203ENST00000350034 PCSK1NQ9UHG2 260 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 CDH9Q9ULB4 789 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 PTCH2Q9Y6C5 1203 aa7.24□□□□□ -1.25
TRIM55-203ENST00000350034 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 A6NNZ2 444 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 C9IYK1 514 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 M0QZQ0 153 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 PIK3R2O00459 728 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 CLDN5O00501 218 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 NDC80O14777 642 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 RIPK2O43353 540 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 PRPSAP2O60256 369 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 DAB1O75553 588 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 TRPA1O75762 1119 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 GRAP2O75791 330 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 BEST1O76090 585 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 SHBGP04278 402 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 MYZAPP0CAP1 466 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 CKBP12277 381 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 PECAM1P16284 738 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 NPR3P17342 541 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 TFE3P19532 575 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 MATKP42679 507 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 CDH6P55285 790 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 MRPS5P82675 430 aaKnown RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 OTUD4Q01804 1114 aaKnown RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 GRIK3Q13003 919 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 TUSC3Q13454 348 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 TFDP2Q14188 446 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 DPYSL3Q14195 570 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 SLC29A2Q14542 456 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 MBTPS1Q14703 1052 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 NOMO1Q15155 1222 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 TRIP13Q15645 432 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms