RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SORBS2O94875 1100 aaKnown RBP19.42■□□□□ 0.7
SCARF1-202ENST00000348987 KLHL38Q2WGJ6 581 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 FKBP1CQ5VVH2 108 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 UGT2A3Q6UWM9 527 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 B3GNT6Q6ZMB0 384 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 ADGRG6Q86SQ4 1221 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 PASD1Q8IV76 773 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 PRICKLE1Q96MT3 831 aaPredicted RBP19.42■□□□□ 0.7
SCARF1-202ENST00000348987 USP29Q9HBJ7 922 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 XPNPEP1Q9NQW7 623 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 ANKEF1Q9NU02 776 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 NDUFA13Q9P0J0 144 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 MYPNQ86TC9 1320 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 JAK3P52333 1124 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 SNRPFP62306 86 aaKnown RBP19.42■□□□□ 0.7
SCARF1-202ENST00000348987 SLC25A3Q00325 362 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 ITGA9Q13797 1035 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 UBAP2LQ14157 1087 aaKnown RBP19.42■□□□□ 0.7
SCARF1-202ENST00000348987 KLC3Q6P597 504 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 KLHDC10Q6PID8 442 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 MFSD7Q6UXD7 560 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 PALM2Q8IXS6 379 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 HIPK4Q8NE63 616 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 USP6NLQ92738 828 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 EPB41L1Q9H4G0 881 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 C10orf88Q9H8K7 445 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 CNTN3Q9P232 1028 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 PTPRJQ12913 1337 aa19.42■□□□□ 0.7
SCARF1-202ENST00000348987 RGS20O76081 388 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 STBD1O95210 358 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 STIP1P31948 543 aaKnown RBP19.41■□□□□ 0.7
SCARF1-202ENST00000348987 NSFP46459 744 aaKnown RBP19.41■□□□□ 0.7
SCARF1-202ENST00000348987 MCCD1P59942 119 aaPredicted RBP19.41■□□□□ 0.7
SCARF1-202ENST00000348987 KRT76Q01546 638 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 TMED1Q13445 227 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 HIC1Q14526 733 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 SWSAP1Q6NVH7 229 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 DUS1LQ6P1R4 473 aaKnown RBP19.41■□□□□ 0.7
SCARF1-202ENST00000348987 AAGABQ6PD74 315 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 SNRNP27Q8WVK2 155 aaKnown RBP19.41■□□□□ 0.7
SCARF1-202ENST00000348987 LZICQ8WZA0 190 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 ATG4CQ96DT6 458 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 APOPT1Q96IL0 206 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 ACAP3Q96P50 834 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 C11orf70Q9BRQ4 267 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 NTPCRQ9BSD7 190 aaKnown RBP19.41■□□□□ 0.7
SCARF1-202ENST00000348987 CCDC106Q9BWC9 280 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 GINM1Q9NU53 330 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 FETUBQ9UGM5 382 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 PCDHA10Q9Y5I2 948 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 SMIM18P0DKX4 95 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 ACOT2P49753 483 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 AQP5P55064 265 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 SFSWAPQ12872 951 aaKnown RBP19.41■□□□□ 0.7
SCARF1-202ENST00000348987 PTK7Q13308 1070 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 EFHC1Q5JVL4 640 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 KYAT3Q6YP21 454 aaKnown RBP19.41■□□□□ 0.7
SCARF1-202ENST00000348987 TRIM42Q8IWZ5 723 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 TMC2Q8TDI7 906 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 CATSPER2Q96P56 530 aa19.41■□□□□ 0.7
SCARF1-202ENST00000348987 RPAP3Q9H6T3 665 aaPredicted RBP19.41■□□□□ 0.7
SCARF1-202ENST00000348987 C15orf38-AP3S2A0A0A6YYH1 394 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 TFAP2AP05549 437 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 HNRNPCP07910 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
SCARF1-202ENST00000348987 CDK4P11802 303 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 ADARP55265 1226 aaKnown RBP19.4■□□□□ 0.7
SCARF1-202ENST00000348987 ANKRD20A4Q4UJ75 823 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 CDHR3Q6ZTQ4 885 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 ARPINQ7Z6K5 226 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 GPD1LQ8N335 351 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 ACSF2Q96CM8 615 aaPredicted RBP19.4■□□□□ 0.7
SCARF1-202ENST00000348987 RILPQ96NA2 401 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 NFASCO94856 1347 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 MAGEB3O15480 346 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 SFNP31947 248 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 GTF2H1P32780 548 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 CPOXP36551 454 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 GALK1P51570 392 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 EPHB1P54762 984 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 FOLH1Q04609 750 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 FAAP100Q0VG06 881 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 BST1Q10588 318 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 TBL3Q12788 808 aaKnown RBP19.4■□□□□ 0.7
SCARF1-202ENST00000348987 TRIP10Q15642 601 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 CES4AQ5XG92 561 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 CIAPIN1Q6FI81 312 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 CCDC60Q8IWA6 550 aaPredicted RBP19.4■□□□□ 0.7
SCARF1-202ENST00000348987 LPAR1Q92633 364 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 TEPSINQ96N21 525 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 GJA3Q9Y6H8 435 aa19.4■□□□□ 0.7
SCARF1-202ENST00000348987 CCDC195A0A1B0GUA6 201 aa19.39■□□□□ 0.7
SCARF1-202ENST00000348987 NR3C2P08235 984 aa19.39■□□□□ 0.7
SCARF1-202ENST00000348987 C6orf222P0C671 652 aaPredicted RBP19.39■□□□□ 0.7
SCARF1-202ENST00000348987 YY1P25490 414 aa19.39■□□□□ 0.7
SCARF1-202ENST00000348987 DSG3P32926 999 aa19.39■□□□□ 0.7
SCARF1-202ENST00000348987 BBS9Q3SYG4 887 aa19.39■□□□□ 0.7
SCARF1-202ENST00000348987 RALGPS1Q5JS13 557 aa19.39■□□□□ 0.7
SCARF1-202ENST00000348987 C1orf228Q6PIY5 440 aa19.39■□□□□ 0.7
SCARF1-202ENST00000348987 METTL25Q8N6Q8 603 aa19.39■□□□□ 0.7
SCARF1-202ENST00000348987 SLITRK1Q96PX8 696 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms