RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 ZC3H18Q86VM9 953 aaKnown RBP20.88■□□□□ 0.93
CXCL16-201ENST00000293778 SESTD1Q86VW0 696 aa20.88■□□□□ 0.93
CXCL16-201ENST00000293778 UNC93AQ86WB7 457 aa20.88■□□□□ 0.93
CXCL16-201ENST00000293778 SCUBE3Q8IX30 993 aa20.88■□□□□ 0.93
CXCL16-201ENST00000293778 CNPY4Q8N129 248 aa20.88■□□□□ 0.93
CXCL16-201ENST00000293778 ATP11CQ8NB49 1132 aa20.88■□□□□ 0.93
CXCL16-201ENST00000293778 RNF157Q96PX1 679 aa20.88■□□□□ 0.93
CXCL16-201ENST00000293778 APOL6Q9BWW8 343 aa20.88■□□□□ 0.93
CXCL16-201ENST00000293778 CNTN3Q9P232 1028 aa20.88■□□□□ 0.93
CXCL16-201ENST00000293778 XPO7Q9UIA9 1087 aaKnown RBP20.88■□□□□ 0.93
CXCL16-201ENST00000293778 TCRBV7S3A2A0A539 114 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 RECQL4O94761 1208 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 TMEM63AO94886 807 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 KRT15P19012 456 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 STIP1P31948 543 aaKnown RBP20.87■□□□□ 0.93
CXCL16-201ENST00000293778 SNX16P57768 344 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 FKBP1BP68106 108 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 BASP1P80723 227 aaKnown RBP20.87■□□□□ 0.93
CXCL16-201ENST00000293778 PDK2Q15119 407 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 BOLA3Q53S33 107 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 ALKAL1Q6UXT8 129 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 FAM172AQ8WUF8 416 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 SGSM3Q96HU1 749 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 MAGEB18Q96M61 343 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 TGS1Q96RS0 853 aaKnown RBP20.87■□□□□ 0.93
CXCL16-201ENST00000293778 TRABDQ9H4I3 376 aa20.87■□□□□ 0.93
CXCL16-201ENST00000293778 MBLAC1A4D2B0 266 aaPredicted RBP20.86■□□□□ 0.93
CXCL16-201ENST00000293778 A8MXQ7 604 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 E7ESA3 106 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 ATP2C2O75185 946 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 RASA2Q15283 850 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 PKN2Q16513 984 aaKnown RBP20.86■□□□□ 0.93
CXCL16-201ENST00000293778 SOWAHAQ2M3V2 549 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 PDIK1LQ8N165 341 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 KHSRPQ92945 711 aaKnown RBP eCLIP20.86■□□□□ 0.93
CXCL16-201ENST00000293778 MRRFQ96E11 262 aaKnown RBP20.86■□□□□ 0.93
CXCL16-201ENST00000293778 RNF19AQ9NV58 838 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 GPATCH2LQ9NWQ4 482 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 SENP1Q9P0U3 644 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 PSMC3IPQ9P2W1 217 aaPredicted RBP20.86■□□□□ 0.93
CXCL16-201ENST00000293778 ZMYND8Q9ULU4 1186 aaPredicted RBP20.86■□□□□ 0.93
CXCL16-201ENST00000293778 UBQLN1Q9UMX0 589 aaKnown RBP20.86■□□□□ 0.93
CXCL16-201ENST00000293778 PAPSS1O43252 624 aaPredicted RBP20.86■□□□□ 0.93
CXCL16-201ENST00000293778 OAS1P00973 400 aaKnown RBP20.86■□□□□ 0.93
CXCL16-201ENST00000293778 DESP17661 470 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 AKAP5P24588 427 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 NRLP54845 237 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 EFHC2Q5JST6 749 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 ARHGAP17Q68EM7 881 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 C1orf228Q6PIY5 440 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 STK32AQ8WU08 396 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 TEKT4Q8WW24 435 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 LPIN3Q9BQK8 851 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 RABGEF1Q9UJ41 708 aa20.86■□□□□ 0.93
CXCL16-201ENST00000293778 H7C0C1 242 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 SPAG7O75391 227 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 ECM2O94769 699 aaPredicted RBP20.85■□□□□ 0.93
CXCL16-201ENST00000293778 SSTR1P30872 391 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 SCTRP47872 440 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 ATP5OP48047 213 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 GEMIN4P57678 1058 aaKnown RBP20.85■□□□□ 0.93
CXCL16-201ENST00000293778 RNASELQ05823 741 aaKnown RBP20.85■□□□□ 0.93
CXCL16-201ENST00000293778 BBS9Q3SYG4 887 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 ZC3H12AQ5D1E8 599 aaKnown RBP20.85■□□□□ 0.93
CXCL16-201ENST00000293778 FBXO36Q8NEA4 188 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 TBCBQ99426 244 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 DPEP3Q9H4B8 488 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 GJD2Q9UKL4 321 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 GNEQ9Y223 722 aaKnown RBP20.85■□□□□ 0.93
CXCL16-201ENST00000293778 USP15Q9Y4E8 981 aaPredicted RBP20.85■□□□□ 0.93
CXCL16-201ENST00000293778 GABBR2O75899 941 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 AXLP30530 894 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 IL9RQ01113 521 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 MFSD10Q14728 455 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 ZDHHC17Q8IUH5 632 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 C7orf31Q8N865 590 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 DNAJB3Q8WWF6 145 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 USP6NLQ92738 828 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 SMC6Q96SB8 1091 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 WDR83Q9BRX9 315 aaKnown RBP20.85■□□□□ 0.93
CXCL16-201ENST00000293778 B3GNT5Q9BYG0 378 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 PCDH18Q9HCL0 1135 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 FETUBQ9UGM5 382 aa20.85■□□□□ 0.93
CXCL16-201ENST00000293778 PIN4Q9Y237 131 aaKnown RBP20.85■□□□□ 0.93
CXCL16-201ENST00000293778 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.84■□□□□ 0.93
CXCL16-201ENST00000293778 APOL1O14791 398 aa20.84■□□□□ 0.93
CXCL16-201ENST00000293778 PRPF4O43172 522 aaKnown RBP eCLIP20.84■□□□□ 0.93
CXCL16-201ENST00000293778 HCRTO43612 131 aa20.84■□□□□ 0.93
CXCL16-201ENST00000293778 IL4RP24394 825 aa20.84■□□□□ 0.93
CXCL16-201ENST00000293778 WDR4P57081 412 aaKnown RBP20.84■□□□□ 0.93
CXCL16-201ENST00000293778 ZKSCAN8Q15776 578 aaPredicted RBP20.84■□□□□ 0.93
CXCL16-201ENST00000293778 FBXO47Q5MNV8 452 aa20.84■□□□□ 0.93
CXCL16-201ENST00000293778 C3orf62Q6ZUJ4 267 aa20.84■□□□□ 0.93
CXCL16-201ENST00000293778 TLK2Q86UE8 772 aa20.84■□□□□ 0.93
CXCL16-201ENST00000293778 PLD5Q8N7P1 536 aa20.84■□□□□ 0.93
CXCL16-201ENST00000293778 SNRNP25Q9BV90 132 aaKnown RBP20.84■□□□□ 0.93
CXCL16-201ENST00000293778 KIF9Q9HAQ2 790 aa20.84■□□□□ 0.93
CXCL16-201ENST00000293778 CD4P01730 458 aa20.84■□□□□ 0.93
CXCL16-201ENST00000293778 TGM2P21980 687 aa20.84■□□□□ 0.93
CXCL16-201ENST00000293778 HIC1Q14526 733 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms