RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 SDC4P31431 198 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 C9orf50Q5SZB4 431 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 CRIPAKQ8N1N5 446 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 UROC1Q96N76 676 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 PNKPQ96T60 521 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 TTPALQ9BTX7 342 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 CWH43Q9H720 699 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 ELAC1Q9H777 363 aaKnown RBP13.95□□□□□ -0.18
ACER3-201ENST00000278544 CALCOCO1Q9P1Z2 691 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 GPD1P21695 349 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 RWDD2BP57060 319 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 SEL1L2Q5TEA6 688 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 MFSD7Q6UXD7 560 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 ZDHHC14Q8IZN3 488 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 SMARCD1Q96GM5 515 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 VCPIP1Q96JH7 1222 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 SLC4A5Q9BY07 1137 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 DMGDHQ9UI17 866 aaKnown RBP13.95□□□□□ -0.18
ACER3-201ENST00000278544 PCDHB8Q9UN66 801 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 VCANP13611 3396 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 TCRBV5S1A1TA0A578 114 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 USP46P62068 366 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 CCDC14Q49A88 953 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 C1orf53Q5VUE5 145 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 C11orf63Q6NUN7 778 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 VPS52Q8N1B4 723 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 PYROXD2Q8N2H3 581 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 SLC7A14Q8TBB6 771 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 MICAL1Q8TDZ2 1067 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 IFT81Q8WYA0 676 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 PEBP4Q96S96 227 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 IL23AQ9NPF7 189 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 SNX10Q9Y5X0 201 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 ABHD14A-ACY1A0A1B0GW23 586 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 PGRMC1O00264 195 aaKnown RBP13.94□□□□□ -0.18
ACER3-201ENST00000278544 TLL1O43897 1013 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 SEC31AO94979 1220 aaKnown RBP13.94□□□□□ -0.18
ACER3-201ENST00000278544 TBX18O95935 607 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 PEX5P50542 639 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 ZNF268Q14587 947 aaPredicted RBP13.94□□□□□ -0.18
ACER3-201ENST00000278544 LIMS2Q7Z4I7 341 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 DDX42Q86XP3 938 aaKnown RBP eCLIP13.94□□□□□ -0.18
ACER3-201ENST00000278544 MCRS1Q96EZ8 462 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 IGSF21Q96ID5 467 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 TBCBQ99426 244 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 MRPL9Q9BYD2 267 aaKnown RBP13.94□□□□□ -0.18
ACER3-201ENST00000278544 SEZ6LQ9BYH1 1024 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.94□□□□□ -0.18
ACER3-201ENST00000278544 MICAL3Q7RTP6 2002 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 XPO1O14980 1071 aaKnown RBP13.94□□□□□ -0.18
ACER3-201ENST00000278544 MSI1O43347 362 aaKnown RBP13.94□□□□□ -0.18
ACER3-201ENST00000278544 HOXA2O43364 376 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 ZRANB2O95218 330 aaKnown RBP eCLIP13.94□□□□□ -0.18
ACER3-201ENST00000278544 HMBSP08397 361 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 SULT1E1P49888 294 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 STILQ15468 1287 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 CA9Q16790 459 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 PPP1R15BQ5SWA1 713 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 ZNF280DQ6N043 979 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 TMEM110Q86TL2 294 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 LBHD1Q9BQE6 289 aaPredicted RBP13.94□□□□□ -0.18
ACER3-201ENST00000278544 SFMBT1Q9UHJ3 866 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 M0QYT0 321 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 SLC5A3P53794 718 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 PLCB3Q01970 1234 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 FBXO22Q8NEZ5 403 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 RNF34Q969K3 372 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 ZNF558Q96NG5 402 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 DPH5Q9H2P9 285 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 USP18Q9UMW8 372 aa13.94□□□□□ -0.18
ACER3-201ENST00000278544 R3HDM2Q9Y2K5 976 aaKnown RBP13.94□□□□□ -0.18
ACER3-201ENST00000278544 C2CD4BA6NLJ0 364 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 MOCS2O96007 188 aaPredicted RBP13.93□□□□□ -0.18
ACER3-201ENST00000278544 SETSIPP0DME0 302 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 PSMD5Q16401 504 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 TMEM240Q5SV17 173 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 SYCP2LQ5T4T6 812 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 RHOT1Q8IXI2 618 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 KCTD6Q8NC69 237 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 CD101Q93033 1021 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 TSPAN18Q96SJ8 248 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 TRIM51Q9BSJ1 452 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 PARD6BQ9BYG5 372 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 DHX35Q9H5Z1 703 aaKnown RBP13.93□□□□□ -0.18
ACER3-201ENST00000278544 DMAP1Q9NPF5 467 aaPredicted RBP13.93□□□□□ -0.18
ACER3-201ENST00000278544 PCDHA3Q9Y5H8 950 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 ARHGEF15O94989 841 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 RARAP10276 462 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 NRLP54845 237 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 CDH6P55285 790 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 ST13P5Q8NFI4 369 aaPredicted RBP13.93□□□□□ -0.18
ACER3-201ENST00000278544 CYP4F11Q9HBI6 524 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 DSEQ9UL01 958 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 NR2E3Q9Y5X4 410 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 SLC4A7Q9Y6M7 1214 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 DOCK6Q96HP0 2047 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 EFCAB8A8MWE9 144 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 CTNNA1P35221 906 aaKnown RBP13.93□□□□□ -0.18
ACER3-201ENST00000278544 YWHAZP63104 245 aaKnown RBP13.93□□□□□ -0.18
ACER3-201ENST00000278544 MRPS5P82675 430 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms