RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 SCARA3Q6AZY7 606 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 TEX9Q8N6V9 391 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 RNF148Q8N7C7 305 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 USP33Q8TEY7 942 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 STK32AQ8WU08 396 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 FAM172AQ8WUF8 416 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 SHOC2Q9UQ13 582 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 SLC4A7Q9Y6M7 1214 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 GOLGA8QA0A0J9YX86 632 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 GOLGA8OA6NCC3 632 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 GOLGA8NF8WBI6 632 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 GOLGA8TH3BQL2 631 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 VNN1O95497 513 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 HMGCRP04035 888 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 OGDHQ02218 1023 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 TMEM132BQ14DG7 1078 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 PDK4Q16654 411 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 ERO1BQ86YB8 467 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 RNF135Q8IUD6 432 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 SAMD3Q8N6K7 520 aa16.83■□□□□ 0.29
PDZRN3-201ENST00000263666 TMEM191CA6NGB0 347 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 KDELR1P24390 212 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 FSTL1Q12841 308 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 SIX1Q15475 284 aaPredicted RBP16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 CYP1B1Q16678 543 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 DENND2DQ9H6A0 471 aaPredicted RBP16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 ZFATQ9P243 1243 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 ZNF536O15090 1300 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 E5RJQ4 531 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 C4BPAP04003 597 aaKnown RBP16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 PTPN11Q06124 597 aaPredicted RBP16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 BIRC2Q13490 618 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 NFIL3Q16649 462 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 ANKS1BQ7Z6G8 1248 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 NAV1Q8NEY1 1877 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 SPDYE1Q8NFV5 336 aaPredicted RBP16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 DDX1Q92499 740 aaKnown RBP16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 EXT2Q93063 718 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 CPXM1Q96SM3 734 aa16.83■□□□□ 0.28
PDZRN3-201ENST00000263666 M0QZ92 97 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 MMP8P22894 467 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 EFNA5P52803 228 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 ASPHQ12797 758 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 MSS51Q4VC12 460 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 RASSF3Q86WH2 238 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 TEKT4Q8WW24 435 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 USP6NLQ92738 828 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 SNX25Q9H3E2 840 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 RSAD1Q9HA92 442 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 ANGPTL2Q9UKU9 493 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 LRP5O75197 1615 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 AIM2O14862 343 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 NFICP08651 508 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 DPYSL3Q14195 570 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 TAF1CQ15572 869 aaPredicted RBP16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 MAP7D1Q3KQU3 841 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 THEMIS2Q5TEJ8 643 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 DSTYKQ6XUX3 929 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 SGF29Q96ES7 293 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 WWP1Q9H0M0 922 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 LRRC4Q9HBW1 653 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 A0A087WZ62 844 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 SLC4A1P02730 911 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 ITKQ08881 620 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 SURF1Q15526 300 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 MOB2Q70IA6 237 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 C12orf56Q8IXR9 622 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 FDXACB1Q9BRP7 624 aaPredicted RBP16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 UBP1Q9NZI7 540 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 DOCK2Q92608 1830 aa16.82■□□□□ 0.28
PDZRN3-201ENST00000263666 NFKBIEO00221 500 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 GTF2A2P52657 109 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 SEPT6Q14141 434 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 PPP1R2P3Q6NXS1 205 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 CPT1BQ92523 772 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 TXLNGYQ9BZA5 131 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 SLC24A2Q9UI40 661 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 KIF1CO43896 1103 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 ADCY3O60266 1144 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 MCL1Q07820 350 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 TRIM42Q8IWZ5 723 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 SCG3Q8WXD2 468 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 FOXP3Q9BZS1 431 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 SIK2Q9H0K1 926 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 PORCNQ9H237 461 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 VCX3BQ9H321 246 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 CYP39A1Q9NYL5 469 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 DNAJC16Q9Y2G8 782 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 TCRBV9S1A1TA0A576 114 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 USP1O94782 785 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 STAMBPO95630 424 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 UBA1P22314 1058 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 NDST1P52848 882 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 TMEM132DQ14C87 1099 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 TRIP10Q15642 601 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 RNF43Q68DV7 783 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 SYT11Q9BT88 431 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 BATF3Q9NR55 127 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 DDX60Q8IY21 1712 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 TMEM63AO94886 807 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms