RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TAF5Q15542 800 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 NBPF20Q3BBV1 942 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 PTPN20Q4JDL3 420 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 DNAL1Q4LDG9 190 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 C1orf146Q5VVC0 180 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 VSIG10LQ86VR7 867 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 SESTD1Q86VW0 696 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 CTAGE3PQ8IX95 158 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 SPATA18Q8TC71 538 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 GORASP1Q9BQQ3 440 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 SIRPGQ9P1W8 387 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 MARCOQ9UEW3 520 aaPredicted RBP16.16■□□□□ 0.18
DDX55-201ENST00000238146 PCSK1NQ9UHG2 260 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 ADGRA2Q96PE1 1338 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 ARID2Q68CP9 1835 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 A0A1B0GVG6 124 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 CXorf49A8MYA2 514 aaPredicted RBP16.15■□□□□ 0.18
DDX55-201ENST00000238146 ASNSP08243 561 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 MYL6P60660 151 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 CDC16Q13042 620 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 EMC2Q15006 297 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 CHI3L2Q15782 390 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 TEX44Q53QW1 395 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 ATG16L1Q676U5 607 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 TRIM42Q8IWZ5 723 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 SLC25A41Q8N5S1 370 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 EMC1Q8N766 993 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 KCTD6Q8NC69 237 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 MTBPQ96DY7 904 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 CFAP36Q96G28 342 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 ZCWPW1Q9H0M4 648 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 PNPLA8Q9NP80 782 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 PCDHGC3Q9UN70 934 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 TTLL3Q9Y4R7 772 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 CCDC195A0A1B0GUA6 201 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 LRRIQ4A6NIV6 560 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 PRR5-ARHGAP8B1AHC4 643 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 WDR46O15213 610 aaKnown RBP16.15■□□□□ 0.18
DDX55-201ENST00000238146 SNRPAP09012 282 aaKnown RBP16.15■□□□□ 0.18
DDX55-201ENST00000238146 HARSP12081 509 aaKnown RBP16.15■□□□□ 0.18
DDX55-201ENST00000238146 STIP1P31948 543 aaKnown RBP16.15■□□□□ 0.18
DDX55-201ENST00000238146 ARHGAP8P85298 464 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 SLC5A9Q2M3M2 681 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 DENND1BQ6P3S1 775 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 GPRASP2Q96D09 838 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 SLC13A1Q9BZW2 595 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 C20orf27Q9GZN8 174 aa16.15■□□□□ 0.18
DDX55-201ENST00000238146 BUD23O43709 281 aaKnown RBP16.14■□□□□ 0.17
DDX55-201ENST00000238146 RFPL1O75677 317 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 KRT37O76014 449 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 ATG7O95352 703 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 NR3C2P08235 984 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 MMP10P09238 476 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 ALDH18A1P54886 795 aaKnown RBP16.14■□□□□ 0.17
DDX55-201ENST00000238146 TGFB2P61812 414 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 TMCO4Q5TGY1 634 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 ANGEL2Q5VTE6 544 aaKnown RBP16.14■□□□□ 0.17
DDX55-201ENST00000238146 NPNTQ6UXI9 565 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 CMASQ8NFW8 434 aaPredicted RBP16.14■□□□□ 0.17
DDX55-201ENST00000238146 GPAMQ9HCL2 828 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 CYTH4Q9UIA0 394 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.14■□□□□ 0.17
DDX55-201ENST00000238146 RNASEH1O60930 286 aaKnown RBP16.14■□□□□ 0.17
DDX55-201ENST00000238146 RGS20O76081 388 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 CUL3Q13618 768 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 BAATQ14032 418 aaPredicted RBP16.14■□□□□ 0.17
DDX55-201ENST00000238146 CNPY1Q3B7I2 92 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 RASIP1Q5U651 963 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 NUDCD3Q8IVD9 361 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 DEPTORQ8TB45 409 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 SHKBP1Q8TBC3 707 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 FNIP1Q8TF40 1166 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 SPATA16Q9BXB7 569 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 CALN1Q9BXU9 219 aa16.14■□□□□ 0.17
DDX55-201ENST00000238146 CCND2P30279 289 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 DARS2Q6PI48 645 aaKnown RBP16.13■□□□□ 0.17
DDX55-201ENST00000238146 KYAT3Q6YP21 454 aaKnown RBP16.13■□□□□ 0.17
DDX55-201ENST00000238146 ARHGAP18Q8N392 663 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 HSPH1Q92598 858 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 PPP2R3CQ969Q6 453 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 FAF2Q96CS3 445 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 CCDC28BQ9BUN5 200 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 MTMR12Q9C0I1 747 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 NIF3L1Q9GZT8 377 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 C1orf21Q9H246 121 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 PLAC1Q9HBJ0 212 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 JPH1Q9HDC5 661 aaPredicted RBP16.13■□□□□ 0.17
DDX55-201ENST00000238146 DMAP1Q9NPF5 467 aaPredicted RBP16.13■□□□□ 0.17
DDX55-201ENST00000238146 KCNG1Q9UIX4 513 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 ZNF180Q9UJW8 692 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 KAT6AQ92794 2004 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 A0A088AWK7 358 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 MAFGO15525 162 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 SERPINA6P08185 405 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 CPOXP36551 454 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 CCNFP41002 786 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 TNFSF9P41273 254 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 ACTR2P61160 394 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 YWHAZP63104 245 aaKnown RBP16.13■□□□□ 0.17
DDX55-201ENST00000238146 ROR1Q01973 937 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms