RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 SIX5Q8N196 739 aa17.32■□□□□ 0.36
LIM2-201ENST00000221973 SLC7A14Q8TBB6 771 aa17.32■□□□□ 0.36
LIM2-201ENST00000221973 SECISBP2LQ93073 1101 aaKnown RBP17.32■□□□□ 0.36
LIM2-201ENST00000221973 PANX2Q96RD6 677 aa17.32■□□□□ 0.36
LIM2-201ENST00000221973 MFSD1Q9H3U5 465 aa17.32■□□□□ 0.36
LIM2-201ENST00000221973 DMAP1Q9NPF5 467 aaPredicted RBP17.32■□□□□ 0.36
LIM2-201ENST00000221973 ARHGAP20Q9P2F6 1191 aa17.32■□□□□ 0.36
LIM2-201ENST00000221973 HSFX1Q9UBD0 423 aa17.32■□□□□ 0.36
LIM2-201ENST00000221973 PCDHGC3Q9UN70 934 aa17.32■□□□□ 0.36
LIM2-201ENST00000221973 YIPF1Q9Y548 306 aa17.32■□□□□ 0.36
LIM2-201ENST00000221973 INSL5Q9Y5Q6 135 aa17.32■□□□□ 0.36
LIM2-201ENST00000221973 BZW2Q9Y6E2 419 aaKnown RBP17.32■□□□□ 0.36
LIM2-201ENST00000221973 F8VP50 259 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 TULP2O00295 520 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 ALDH1A3P47895 512 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 SLC8A3P57103 927 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 GSDMDP57764 484 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 BST2Q10589 180 aaKnown RBP17.31■□□□□ 0.36
LIM2-201ENST00000221973 TWF1Q12792 350 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 HTR4Q13639 388 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 MEA1Q16626 185 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 PKDCCQ504Y2 493 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 ASCL5Q7RTU5 278 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 ZMIZ2Q8NF64 920 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 ST13P5Q8NFI4 369 aaPredicted RBP17.31■□□□□ 0.36
LIM2-201ENST00000221973 GPR152Q8TDT2 470 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 PCDHB18PQ96TA0 734 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 CHP1Q99653 195 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 SYT11Q9BT88 431 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.31■□□□□ 0.36
LIM2-201ENST00000221973 WNT16Q9UBV4 365 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 CEP83Q9Y592 693 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 NOTCH4Q99466 2003 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 PTPRZ1P23471 2315 aaPredicted RBP17.31■□□□□ 0.36
LIM2-201ENST00000221973 FRYLO94915 3013 aa17.31■□□□□ 0.36
LIM2-201ENST00000221973 TRIM66O15016 1216 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 SETSIPP0DME0 302 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 ATF6P18850 670 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 ANXA13P27216 316 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 EIF4A3P38919 411 aaKnown RBP17.3■□□□□ 0.36
LIM2-201ENST00000221973 GPD2P43304 727 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 RGS7P49802 495 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 RPL10AP62906 217 aaKnown RBP17.3■□□□□ 0.36
LIM2-201ENST00000221973 NTHL1P78549 312 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 PPM1LQ5SGD2 360 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 CCDC105Q8IYK2 499 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 C1orf131Q8NDD1 294 aaKnown RBP17.3■□□□□ 0.36
LIM2-201ENST00000221973 STKLD1Q8NE28 680 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 GIPC2Q8TF65 315 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 NXPE3Q969Y0 559 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 PDLIM2Q96JY6 352 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 C8orf48Q96LL4 319 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.3■□□□□ 0.36
LIM2-201ENST00000221973 LHX5Q9H2C1 402 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 PIDD1Q9HB75 910 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 CSNK1G1Q9HCP0 422 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 FBXL21Q9UKT6 434 aa17.3■□□□□ 0.36
LIM2-201ENST00000221973 XPO1O14980 1071 aaKnown RBP17.29■□□□□ 0.36
LIM2-201ENST00000221973 LRG1P02750 347 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 HNRNPA1P09651 372 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIM2-201ENST00000221973 SRFP11831 508 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 NAA35Q5VZE5 725 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 TRIM72Q6ZMU5 477 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 GET4Q7L5D6 327 aaPredicted RBP17.29■□□□□ 0.36
LIM2-201ENST00000221973 GRASPQ7Z6J2 395 aaPredicted RBP17.29■□□□□ 0.36
LIM2-201ENST00000221973 PIGZQ86VD9 579 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 WDTC1Q8N5D0 677 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 TMEM35BQ8NCS4 154 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 OLIG1Q8TAK6 271 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 SLC35F5Q8WV83 523 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 CPA5Q8WXQ8 436 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 RPP25Q9BUL9 199 aaKnown RBP17.29■□□□□ 0.36
LIM2-201ENST00000221973 DEF6Q9H4E7 631 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 CYTH4Q9UIA0 394 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 FAM186AA6NE01 2351 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 SPTBN4Q9H254 2564 aa17.29■□□□□ 0.36
LIM2-201ENST00000221973 PRR23AA6NEV1 266 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 HHLA1C9JL84 531 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 DDX3XO00571 662 aaKnown RBP eCLIP17.28■□□□□ 0.36
LIM2-201ENST00000221973 CCL16O15467 120 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 LSM8O95777 96 aaKnown RBP17.28■□□□□ 0.36
LIM2-201ENST00000221973 CYP1A1P04798 512 aaPredicted RBP17.28■□□□□ 0.36
LIM2-201ENST00000221973 PTMAP06454 111 aaKnown RBP17.28■□□□□ 0.36
LIM2-201ENST00000221973 HOXA9P31269 272 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 PLA2G4AP47712 749 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 EPHB3P54753 998 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 NOMO3P69849 1222 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 CDK17Q00537 523 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 PLD1Q13393 1074 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 VEPH1Q14D04 833 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 CLEC16AQ2KHT3 1053 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 PMF1Q6P1K2 205 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 GPRIN1Q7Z2K8 1008 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 VPS36Q86VN1 386 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 FGF14Q92915 247 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 NHEJ1Q9H9Q4 299 aaPredicted RBP17.28■□□□□ 0.36
LIM2-201ENST00000221973 ST7Q9NRC1 585 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 ADAMTS1Q9UHI8 967 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 NUMBLQ9Y6R0 609 aa17.28■□□□□ 0.36
LIM2-201ENST00000221973 SSU72P8A0A1W2PR75 194 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms