RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Per2O54943 1257 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Vti1aO89116 217 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Alox15P39654 663 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Dlg3P70175 849 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Tfdp1Q08639 410 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ccndbp1Q3TVC7 356 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mphosph8Q3TYA6 858 aaKnown RBP13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Rnf220Q6PDX6 566 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 TdrkhQ80VL1 560 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Stau2Q8CJ67 570 aaKnown RBP13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Spag16Q8K450 639 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Nudcd3Q8R1N4 363 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Myoz3Q8R4E4 245 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Olfr615Q8VGY4 313 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ciapin1Q8WTY4 309 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ascc2Q91WR3 749 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Rnf112Q96DY5 654 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Tmco5aQ9D9D5 303 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Rassf7Q9DD19 359 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Sbf2E9PXF8 1872 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mageb4A2A9R3 556 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Myl1P05977 188 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Crhr1P35347 415 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Tmem165P52875 323 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Stmn1P54227 149 aaKnown RBP13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Pex2P55098 305 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Gabrb2P63137 512 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Smad1P70340 465 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Neurl1bQ0MW30 546 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Map3k9Q3U1V8 1077 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Rab34Q64008 259 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Fam163bQ8BUM6 167 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Gpr20Q8BYC4 358 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Phactr3Q8BYK5 558 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Q8BZE1 841 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ccser1Q8C0C4 895 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Q8CIL4 281 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mcoln2Q8K595 566 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Cys1Q8R4T1 145 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Zcchc18Q8VD24 393 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Prl2a1Q9JHK0 228 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 ClcnkbQ9WUB6 687 aa13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Top3bQ9Z321 862 aaKnown RBP13.96□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ankfn1A0A140LIW7 1083 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Gm12394A2AKP6 982 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Atp8b4A2ANX3 1194 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Rps6ka3P18654 740 aaKnown RBP13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Abhd15Q5F2F2 459 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 SnrpaQ62189 287 aaKnown RBP13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Vps72Q62481 368 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Cyp2c29Q64458 490 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 CbarpQ66L44 698 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ubxn7Q6P5G6 467 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Cand1Q6ZQ38 1230 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Tas2r102Q7M717 329 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Olfr670Q7TRP3 312 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Siglec10Q80ZE3 688 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ppme1Q8BVQ5 386 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Dhx32Q8BZS9 744 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Otud7aQ8R554 926 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Gstm4Q8R5I6 218 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Alg9Q8VDI9 611 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Fam212aQ9CX62 282 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Mms19Q9D071 1031 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 PolhQ9JJN0 694 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Coro1cQ9WUM4 474 aa13.96□□□□□ -0.18
Nup88-201ENSMUST00000035283 Arhgef37A1IGU4 676 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Tatdn2B7ZNL9 783 aaKnown RBP13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Gm3371F7CQW8 167 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Klhl33G3UW92 533 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Nedd9O35177 833 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Rb1P13405 921 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 ItgavP43406 1044 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Fam172aQ3TNH5 417 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Lrch2Q3UMG5 773 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Slc26a2Q62273 739 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Znf598Q80YR4 908 aaKnown RBP13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Lrrc27Q80YS5 523 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Senp7Q8BUH8 1037 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Wdr27Q8C5V5 780 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Kctd12bQ8C7J6 292 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Agbl2Q8CDK2 862 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Clip4Q8CI96 704 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Olfr390Q8VEZ7 311 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Pcdhb1Q91Y08 818 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 HlcsQ920N2 722 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Klhl35Q9CZ49 574 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Map3k20Q9ESL4 802 aaKnown RBP13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Bace2Q9JL18 514 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Mpp5Q9JLB2 675 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Piwil1Q9JMB7 862 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Pck1Q9Z2V4 622 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Olfr456B2RT27 312 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Svs3aF2Z472 265 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Gm8444F6XS56 118 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Mfsd4b4J3QNS5 503 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Klf6O08584 283 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Tnk2O54967 1055 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 SfnO70456 248 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms