RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Smyd1P97443 490 aa19.11■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ccdc85aQ5SP85 500 aa19.11■□□□□ 0.65
Ebf3-201ENSMUST00000033378 HrQ61645 1182 aa19.11■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Dlg4Q62108 724 aa19.11■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Q6GQV0 436 aa19.11■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Pcdhb11Q91UZ8 797 aa19.11■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Batf3Q9D275 118 aa19.11■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Sun1Q9D666 913 aaKnown RBP19.11■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ruvbl2Q9WTM5 463 aaKnown RBP19.11■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Smok3aC0HKC8 504 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Smok3bC0HKC9 504 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Adam15O88839 864 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Impdh2P24547 514 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Grid2ipQ0QWG9 1203 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Shroom1Q5SX79 823 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 BegainQ68EF6 600 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 HpseQ6YGZ1 535 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Dna2Q6ZQJ5 1062 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Usp20Q8C6M1 916 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Poc5Q9DBS8 558 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Olig1Q9JKN5 260 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Efcab12V9GXH0 673 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ccdc8D3YZV8 685 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Gm10639E9Q6L7 222 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 PurbO35295 324 aaKnown RBP19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Gsta2P10648 222 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Szrd1Q6NXN1 152 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ccdc134Q8C7V8 229 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Sec14l2Q99J08 403 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Slfn8B1ARD8 910 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Sult1e1P49891 295 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Frmd5Q6P5H6 517 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Lrrc24Q8BHA1 521 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Rilpl2Q99LE1 197 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Sh3bp5lQ99LH9 392 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ankef1Q9D2J7 775 aa19.1■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ssxb9A2BI93 185 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Cdk14O35495 469 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Apoa4P06728 395 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Man1a1P45700 655 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Slc38a5Q3U1J0 479 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Pik3r5Q5SW28 871 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Soat1Q61263 540 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 R3hdm2Q80TM6 1044 aaKnown RBP19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Clip4Q8CI96 704 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ppp1r11Q8K1L5 131 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Tmem82Q8R115 356 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 HyiQ8R1F5 277 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Wdr98Q8VC42 657 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Vps11Q91W86 941 aaKnown RBP19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 NcaldQ91X97 193 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Kifc1Q9QWT9 674 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Il1rl1P14719 567 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 TdgP56581 421 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 NfibP97863 570 aaKnown RBP19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Gcnt3Q5JCT0 437 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Orc2Q60862 576 aaKnown RBP19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Olfr392Q7TRX6 312 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Atg14Q8CDJ3 492 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Trappc12Q8K2L8 797 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Prpf39Q8K2Z2 665 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ubiad1Q9DC60 336 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Arhgef26D3YYY8 869 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Rpl21O09167 160 aaKnown RBP19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Mtco1P00397 514 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Lilrb3P97484 841 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Sugp1Q8CH02 643 aaKnown RBP19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Snx9Q91VH2 595 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ubxn6Q99PL6 442 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Lztr1Q9CQ33 837 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Aldh1b1Q9CZS1 519 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Gpihbp1Q9D1N2 228 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ggps1Q9WTN0 300 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Rap1gapA2ALS5 663 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ctnnd2O35927 1247 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Faf2Q3TDN2 445 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Gdpd4Q3TT99 632 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Dmc1Q61880 340 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Gm5414Q6IFZ8 552 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ggt7Q99JP7 662 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 HemgnQ9ERZ0 503 aa19.09■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Gm44511A0A0N4SW10 223 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Zc3h7aE9PWW6 970 aaKnown RBP19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Rtn2O70622 471 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Epha3P29319 983 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Alkbh5Q3TSG4 395 aaKnown RBP19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Runx1t1Q61909 577 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Trim62Q80V85 475 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 TgdsQ8VDR7 355 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Oas1dQ8VI95 361 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Tjp3Q9QXY1 905 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Siah3B2RWG3 268 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Capn6O35646 641 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Sptlc1O35704 473 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Pyroxd1Q3TMV7 498 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ccdc85bQ6PDY0 202 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Ccdc28bQ8CEG5 200 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Cul2Q9D4H8 745 aa19.08■□□□□ 0.65
Ebf3-201ENSMUST00000033378 Sat1P48026 171 aa19.08■□□□□ 0.64
Ebf3-201ENSMUST00000033378 Nr2c2P49117 596 aa19.08■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms