RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W LHP1P33399 275 aaKnown RBP-0.87□□□□□ -2.55
VAM3YOR106W YMR090WQ04304 227 aaKnown RBP-0.87□□□□□ -2.55
VAM3YOR106W YDR246W-AQ3E763 66 aa-0.87□□□□□ -2.55
VAM3YOR106W TY1B-PR2P0C2J0 1756 aa-0.88□□□□□ -2.55
VAM3YOR106W UBC5P15732 148 aa-0.88□□□□□ -2.55
VAM3YOR106W MDN1Q12019 4910 aaKnown RBP-0.88□□□□□ -2.55
VAM3YOR106W DNF3Q12674 1656 aa-0.89□□□□□ -2.55
VAM3YOR106W FMP27Q06179 2628 aa-0.9□□□□□ -2.55
VAM3YOR106W TOM6P33448 61 aa-0.92□□□□□ -2.56
VAM3YOR106W YOR289WQ12012 251 aaPredicted RBP-0.92□□□□□ -2.56
VAM3YOR106W TY3B-IQ7LHG5 1498 aaKnown RBP-0.92□□□□□ -2.56
VAM3YOR106W EMC5P40540 141 aa-0.93□□□□□ -2.56
VAM3YOR106W SDH6Q3E785 79 aa-0.93□□□□□ -2.56
VAM3YOR106W HMRA1P0CY11 126 aa-0.94□□□□□ -2.56
VAM3YOR106W YBR090CP38253 122 aa-0.94□□□□□ -2.56
VAM3YOR106W ECM12O13529 151 aa-0.95□□□□□ -2.56
VAM3YOR106W YHR214C-DP0CX93 97 aa-0.95□□□□□ -2.56
VAM3YOR106W YHL005CP38752 130 aa-0.95□□□□□ -2.56
VAM3YOR106W YGR025WP53216 100 aa-0.95□□□□□ -2.56
VAM3YOR106W TY1B-DR6P0C2I3 1755 aa-0.96□□□□□ -2.56
VAM3YOR106W TY1B-LR2P0C2I5 1755 aa-0.96□□□□□ -2.56
VAM3YOR106W TY1B-JR2P47100 1755 aaKnown RBP-0.96□□□□□ -2.56
VAM3YOR106W TY1B-MR1Q04214 1755 aa-0.96□□□□□ -2.56
VAM3YOR106W TY1B-MR2Q04670 1755 aaKnown RBP-0.96□□□□□ -2.56
VAM3YOR106W TY1B-NL1Q12112 1755 aa-0.96□□□□□ -2.56
VAM3YOR106W TY1B-GR1Q12141 1755 aa-0.96□□□□□ -2.56
VAM3YOR106W TY1B-GR3Q12316 1755 aa-0.96□□□□□ -2.56
VAM3YOR106W TY1B-PLQ12414 1755 aaKnown RBP-0.96□□□□□ -2.56
VAM3YOR106W TY1B-ORQ92393 1755 aa-0.96□□□□□ -2.56
VAM3YOR106W DYN1P36022 4092 aa-0.97□□□□□ -2.57
VAM3YOR106W SNU13P39990 126 aaKnown RBP-0.99□□□□□ -2.57
VAM3YOR106W YMR122W-AQ3E842 84 aa-0.99□□□□□ -2.57
VAM3YOR106W RGI1P40043 161 aaPredicted RBP-1□□□□□ -2.57
VAM3YOR106W BSC4P53841 131 aa-1□□□□□ -2.57
VAM3YOR106W ATP18P81450 59 aa-1□□□□□ -2.57
VAM3YOR106W RRT15Q3E811 62 aa-1□□□□□ -2.57
VAM3YOR106W KSH1Q8TGJ3 72 aa-1□□□□□ -2.57
VAM3YOR106W STT4P37297 1900 aa-1□□□□□ -2.57
VAM3YOR106W MEC1P38111 2368 aa-1.01□□□□□ -2.57
VAM3YOR106W RPS12P48589 143 aaKnown RBP-1.01□□□□□ -2.57
VAM3YOR106W PDR11P40550 1411 aa-1.03□□□□□ -2.57
VAM3YOR106W GEA1P47102 1408 aaPredicted RBP-1.03□□□□□ -2.57
VAM3YOR106W YAL065CO13511 128 aa-1.03□□□□□ -2.57
VAM3YOR106W ECM29P38737 1868 aa-1.03□□□□□ -2.57
VAM3YOR106W YBL044WP38194 122 aa-1.04□□□□□ -2.58
VAM3YOR106W YER137CP40083 148 aaKnown RBP-1.04□□□□□ -2.58
VAM3YOR106W TSC11P40061 1430 aa-1.05□□□□□ -2.58
VAM3YOR106W TY1B-DR5P0C2I2 1755 aa-1.06□□□□□ -2.58
VAM3YOR106W TY1B-PR1P0C2I9 1755 aaKnown RBP-1.06□□□□□ -2.58
VAM3YOR106W TY1B-JR1P47098 1755 aa-1.06□□□□□ -2.58
VAM3YOR106W TY1B-ML2Q03434 1755 aaKnown RBP-1.06□□□□□ -2.58
VAM3YOR106W TY1B-ER1Q03612 1755 aa-1.06□□□□□ -2.58
VAM3YOR106W TY1B-ER2Q03619 1755 aa-1.06□□□□□ -2.58
VAM3YOR106W TY1B-DR1Q03855 1755 aa-1.06□□□□□ -2.58
VAM3YOR106W TY1B-ML1Q04711 1755 aaKnown RBP-1.06□□□□□ -2.58
VAM3YOR106W TY1B-LR1Q12088 1755 aaKnown RBP-1.06□□□□□ -2.58
VAM3YOR106W TY1B-GR2Q12269 1755 aa-1.06□□□□□ -2.58
VAM3YOR106W TY1B-OLQ12273 1755 aa-1.06□□□□□ -2.58
VAM3YOR106W TY1B-DR3Q99231 1755 aa-1.06□□□□□ -2.58
VAM3YOR106W FPR2P32472 135 aa-1.07□□□□□ -2.58
VAM3YOR106W RPS29AP41057 56 aaKnown RBP-1.07□□□□□ -2.58
VAM3YOR106W YPR108W-AQ3E7B3 70 aa-1.07□□□□□ -2.58
VAM3YOR106W YCR085WP25650 117 aa-1.08□□□□□ -2.58
VAM3YOR106W EDC1P53080 175 aaPredicted RBP-1.08□□□□□ -2.58
VAM3YOR106W RPA190P10964 1664 aaKnown RBP-1.09□□□□□ -2.58
VAM3YOR106W MOT1P32333 1867 aa-1.09□□□□□ -2.58
VAM3YOR106W NHP2P32495 156 aaPredicted RBP-1.1□□□□□ -2.59
VAM3YOR106W MHF2Q3E829 80 aa-1.1□□□□□ -2.59
VAM3YOR106W PAU23Q07987 124 aa-1.11□□□□□ -2.59
VAM3YOR106W PAU17Q12370 124 aa-1.11□□□□□ -2.59
VAM3YOR106W REV3P14284 1504 aa-1.11□□□□□ -2.59
VAM3YOR106W MMS1Q06211 1407 aa-1.12□□□□□ -2.59
VAM3YOR106W YHR050W-AQ05451 56 aa-1.12□□□□□ -2.59
VAM3YOR106W YMR001C-AQ8TGS9 76 aa-1.12□□□□□ -2.59
VAM3YOR106W YBR032WP38223 100 aa-1.13□□□□□ -2.59
VAM3YOR106W MSL1P40567 111 aaPredicted RBP-1.13□□□□□ -2.59
VAM3YOR106W FYV7Q12247 151 aa-1.13□□□□□ -2.59
VAM3YOR106W GEA2P39993 1459 aaKnown RBP-1.13□□□□□ -2.59
VAM3YOR106W YDR029WQ12111 104 aa-1.14□□□□□ -2.59
VAM3YOR106W POL1P13382 1468 aa-1.15□□□□□ -2.59
VAM3YOR106W SUS1Q6WNK7 96 aa-1.16□□□□□ -2.6
VAM3YOR106W YDR042CQ03205 200 aa-1.2□□□□□ -2.6
VAM3YOR106W YOL097W-AQ3E7Y9 61 aa-1.22□□□□□ -2.6
VAM3YOR106W TY2B-LR1P0C2J3 1770 aa-1.23□□□□□ -2.61
VAM3YOR106W TY2B-FP0CX63 1770 aa-1.23□□□□□ -2.61
VAM3YOR106W TY2B-GR2P0CX64 1770 aa-1.23□□□□□ -2.61
VAM3YOR106W TY2B-CP25384 1770 aa-1.23□□□□□ -2.61
VAM3YOR106W UTP10P42945 1769 aaKnown RBP-1.23□□□□□ -2.61
VAM3YOR106W TY2B-DR2Q03494 1770 aa-1.23□□□□□ -2.61
VAM3YOR106W TY2B-DR3Q07791 1770 aaKnown RBP-1.23□□□□□ -2.61
VAM3YOR106W TY2B-OR1Q12113 1770 aa-1.23□□□□□ -2.61
VAM3YOR106W TY2B-DR1Q12472 1770 aa-1.23□□□□□ -2.61
VAM3YOR106W TY2B-BQ12491 1770 aa-1.23□□□□□ -2.61
VAM3YOR106W TY2B-OR2Q12501 1770 aa-1.23□□□□□ -2.61
VAM3YOR106W SCP1Q08873 200 aa-1.23□□□□□ -2.61
VAM3YOR106W GDB1Q06625 1536 aa-1.24□□□□□ -2.61
VAM3YOR106W NOP10Q6Q547 58 aaPredicted RBP-1.24□□□□□ -2.61
VAM3YOR106W RPO21P04050 1733 aaKnown RBP-1.24□□□□□ -2.61
VAM3YOR106W YKL068W-AQ3E826 78 aa-1.26□□□□□ -2.61
VAM3YOR106W MDS3P53094 1487 aa-1.27□□□□□ -2.61
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms