RNA–Protein interactions for RNA: YMR224C

MRE11, Transcript of Nuclease subunit of the MRX complex with Rad50p and Xrs2p, yeastyeast

Gene MRE11, Length 2,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRE11YMR224C POC4Q12245 148 aaPredicted RBP2.28□□□□□ -2.04
MRE11YMR224C YOR034C-AQ3E735 80 aa2.28□□□□□ -2.04
MRE11YMR224C YRF1-1P0CX20 1796 aa2.28□□□□□ -2.04
MRE11YMR224C YRF1-5P0CX21 1796 aa2.28□□□□□ -2.04
MRE11YMR224C YRF1-8P0CX22 1796 aa2.28□□□□□ -2.04
MRE11YMR224C HIR3P47171 1648 aa2.28□□□□□ -2.05
MRE11YMR224C BSC4P53841 131 aa2.27□□□□□ -2.05
MRE11YMR224C DNF2Q12675 1612 aa2.26□□□□□ -2.05
MRE11YMR224C YBR292CP38357 123 aa2.26□□□□□ -2.05
MRE11YMR224C PEP1P32319 1579 aa2.25□□□□□ -2.05
MRE11YMR224C THO2P53552 1597 aaKnown RBP2.24□□□□□ -2.05
MRE11YMR224C RPO31P04051 1460 aa2.24□□□□□ -2.05
MRE11YMR224C YCF1P39109 1515 aaKnown RBP2.23□□□□□ -2.05
MRE11YMR224C YOR343CQ12484 108 aa2.21□□□□□ -2.06
MRE11YMR224C PDR15Q04182 1529 aaKnown RBP2.21□□□□□ -2.06
MRE11YMR224C RPL43AP0CX25 92 aaKnown RBP2.2□□□□□ -2.06
MRE11YMR224C RPL43BP0CX26 92 aa2.2□□□□□ -2.06
MRE11YMR224C TCB3Q03640 1545 aaKnown RBP2.2□□□□□ -2.06
MRE11YMR224C YPR117WQ06116 2489 aa2.19□□□□□ -2.06
MRE11YMR224C TOM6P33448 61 aa2.19□□□□□ -2.06
MRE11YMR224C YPR145C-AQ2V2P0 78 aa2.19□□□□□ -2.06
MRE11YMR224C YDR010CQ12426 110 aa2.18□□□□□ -2.06
MRE11YMR224C AUA1P32450 94 aa2.17□□□□□ -2.06
MRE11YMR224C TY4B-HP0C2J7 1802 aa2.17□□□□□ -2.06
MRE11YMR224C YHR214C-DP0CX93 97 aa2.16□□□□□ -2.06
MRE11YMR224C PAU23Q07987 124 aa2.16□□□□□ -2.06
MRE11YMR224C PAU17Q12370 124 aa2.16□□□□□ -2.06
MRE11YMR224C TY1B-PR2P0C2J0 1756 aa2.16□□□□□ -2.06
MRE11YMR224C YHR173CP38864 112 aa2.16□□□□□ -2.06
MRE11YMR224C FPR2P32472 135 aa2.15□□□□□ -2.07
MRE11YMR224C YBR072C-AQ3E794 53 aa2.15□□□□□ -2.07
MRE11YMR224C SSK2P53599 1579 aa2.14□□□□□ -2.07
MRE11YMR224C YNL042W-BQ3E7Z2 85 aa2.14□□□□□ -2.07
MRE11YMR224C YRF1-2P40105 1681 aa2.14□□□□□ -2.07
MRE11YMR224C URA2P07259 2214 aaKnown RBP2.14□□□□□ -2.07
MRE11YMR224C TOR1P35169 2470 aa2.14□□□□□ -2.07
MRE11YMR224C LSM2P38203 95 aaKnown RBP2.13□□□□□ -2.07
MRE11YMR224C POL2P21951 2222 aaKnown RBP2.13□□□□□ -2.07
MRE11YMR224C RPL37BP51402 88 aaKnown RBP2.13□□□□□ -2.07
MRE11YMR224C YDR381C-AQ3E6R5 114 aa2.13□□□□□ -2.07
MRE11YMR224C ESP1Q03018 1630 aa2.12□□□□□ -2.07
MRE11YMR224C YER188C-AP0C0V2 99 aa2.12□□□□□ -2.07
MRE11YMR224C PDX3P38075 228 aaKnown RBP2.12□□□□□ -2.07
MRE11YMR224C YOR105WQ08504 108 aa2.12□□□□□ -2.07
MRE11YMR224C YHR213W-AQ8TGT4 77 aa2.12□□□□□ -2.07
MRE11YMR224C YLR307C-AQ3E825 87 aa2.11□□□□□ -2.07
MRE11YMR224C MLP1Q02455 1875 aaKnown RBP2.1□□□□□ -2.07
MRE11YMR224C YLR157W-EP0CF00 54 aa2.1□□□□□ -2.07
MRE11YMR224C Q0032Q9ZZX7 96 aa2.1□□□□□ -2.07
MRE11YMR224C RKR1Q04781 1562 aa2.1□□□□□ -2.07
MRE11YMR224C MMS22Q06164 1454 aa2.1□□□□□ -2.07
MRE11YMR224C YAL065CO13511 128 aa2.1□□□□□ -2.07
MRE11YMR224C YBR201C-AQ2V2Q3 67 aa2.1□□□□□ -2.07
MRE11YMR224C NOP10Q6Q547 58 aaPredicted RBP2.1□□□□□ -2.07
MRE11YMR224C YOR314WQ12506 109 aa2.08□□□□□ -2.08
MRE11YMR224C YKL065W-AQ2V2P2 73 aa2.08□□□□□ -2.08
MRE11YMR224C YIL156W-BQ2V2P4 73 aa2.08□□□□□ -2.08
MRE11YMR224C YMR122W-AQ3E842 84 aa2.07□□□□□ -2.08
MRE11YMR224C YDR119W-AQ2V2P9 66 aa2.06□□□□□ -2.08
MRE11YMR224C TY1B-BRQ12193 1756 aa2.05□□□□□ -2.08
MRE11YMR224C TY1B-NL2Q99337 1749 aaKnown RBP2.03□□□□□ -2.08
MRE11YMR224C XRN1P22147 1528 aaKnown RBP2.03□□□□□ -2.08
MRE11YMR224C SPT6P23615 1451 aaKnown RBP2.03□□□□□ -2.08
MRE11YMR224C SWM2P40342 146 aa2.02□□□□□ -2.09
MRE11YMR224C RPC10P40422 70 aa2.02□□□□□ -2.09
MRE11YMR224C COX7P10174 60 aa2.02□□□□□ -2.09
MRE11YMR224C ECM29P38737 1868 aa2.01□□□□□ -2.09
MRE11YMR224C CUP1-1P0CX80 61 aa2□□□□□ -2.09
MRE11YMR224C CUP1-2P0CX81 61 aa2□□□□□ -2.09
MRE11YMR224C DOP1Q03921 1698 aa2□□□□□ -2.09
MRE11YMR224C DNF3Q12674 1656 aa2□□□□□ -2.09
MRE11YMR224C NUP159P40477 1460 aa2□□□□□ -2.09
MRE11YMR224C ATP18P81450 59 aa2□□□□□ -2.09
MRE11YMR224C TY1B-BLQ12490 1755 aa1.98□□□□□ -2.09
MRE11YMR224C PAI3P01094 68 aa1.97□□□□□ -2.09
MRE11YMR224C YGR121W-AQ3E816 71 aa1.97□□□□□ -2.09
MRE11YMR224C RPL38P49167 78 aaKnown RBP1.97□□□□□ -2.09
MRE11YMR224C ATG2P53855 1592 aa1.96□□□□□ -2.09
MRE11YMR224C QCR9P22289 66 aa1.96□□□□□ -2.1
MRE11YMR224C YOL164W-AQ3E7A5 60 aa1.96□□□□□ -2.1
MRE11YMR224C RIM15P43565 1770 aa1.95□□□□□ -2.1
MRE11YMR224C VPS15P22219 1454 aa1.95□□□□□ -2.1
MRE11YMR224C UTP10P42945 1769 aaKnown RBP1.95□□□□□ -2.1
MRE11YMR224C TIM12P32830 109 aa1.94□□□□□ -2.1
MRE11YMR224C CHC1P22137 1653 aaKnown RBP1.94□□□□□ -2.1
MRE11YMR224C YNL190WP53872 204 aa1.94□□□□□ -2.1
MRE11YMR224C SGF11Q03067 99 aa1.94□□□□□ -2.1
MRE11YMR224C TY1B-LR3P0C2I6 1755 aaKnown RBP1.93□□□□□ -2.1
MRE11YMR224C TY1B-PR3P0C2J1 1755 aaKnown RBP1.93□□□□□ -2.1
MRE11YMR224C USO1P25386 1790 aa1.93□□□□□ -2.1
MRE11YMR224C YJR107C-AP0CT86 78 aa1.93□□□□□ -2.1
MRE11YMR224C YDL022C-AP0C5L6 82 aa1.92□□□□□ -2.1
MRE11YMR224C NUP170P38181 1502 aa1.92□□□□□ -2.1
MRE11YMR224C MOT1P32333 1867 aa1.91□□□□□ -2.1
MRE11YMR224C YNL198CP40166 100 aa1.91□□□□□ -2.1
MRE11YMR224C SDH6Q3E785 79 aa1.9□□□□□ -2.11
MRE11YMR224C ATX1P38636 73 aa1.89□□□□□ -2.11
MRE11YMR224C BPH1P25356 2167 aa1.89□□□□□ -2.11
MRE11YMR224C YGR035W-AQ45U48 73 aa1.89□□□□□ -2.11
MRE11YMR224C GCN1P33892 2672 aaKnown RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 87.4 ms