RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeastyeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EBP2YKL172W YPR145C-AQ2V2P0 78 aa1.34□□□□□ -2.19
EBP2YKL172W YHR213W-BQ8TGK1 99 aa1.34□□□□□ -2.19
EBP2YKL172W MMS22Q06164 1454 aa1.34□□□□□ -2.19
EBP2YKL172W HFA1P32874 2273 aa1.33□□□□□ -2.2
EBP2YKL172W NTE1Q04958 1679 aa1.33□□□□□ -2.2
EBP2YKL172W FPR2P32472 135 aa1.33□□□□□ -2.2
EBP2YKL172W PDX3P38075 228 aaKnown RBP1.33□□□□□ -2.2
EBP2YKL172W HHY1P39982 102 aa1.33□□□□□ -2.2
EBP2YKL172W YOR314WQ12506 109 aa1.33□□□□□ -2.2
EBP2YKL172W YRF1-2P40105 1681 aa1.32□□□□□ -2.2
EBP2YKL172W NUP159P40477 1460 aa1.32□□□□□ -2.2
EBP2YKL172W ATX1P38636 73 aa1.32□□□□□ -2.2
EBP2YKL172W SWM2P40342 146 aa1.32□□□□□ -2.2
EBP2YKL172W PAU23Q07987 124 aa1.32□□□□□ -2.2
EBP2YKL172W PAU17Q12370 124 aa1.32□□□□□ -2.2
EBP2YKL172W YDR010CQ12426 110 aa1.32□□□□□ -2.2
EBP2YKL172W YDR119W-AQ2V2P9 66 aa1.32□□□□□ -2.2
EBP2YKL172W TY1B-BRQ12193 1756 aa1.31□□□□□ -2.2
EBP2YKL172W YMR141CP40211 102 aa1.31□□□□□ -2.2
EBP2YKL172W YRF1-1P0CX20 1796 aa1.31□□□□□ -2.2
EBP2YKL172W YRF1-5P0CX21 1796 aa1.31□□□□□ -2.2
EBP2YKL172W YRF1-8P0CX22 1796 aa1.31□□□□□ -2.2
EBP2YKL172W TY1B-NL2Q99337 1749 aaKnown RBP1.3□□□□□ -2.2
EBP2YKL172W URB1P34241 1764 aaKnown RBP1.29□□□□□ -2.2
EBP2YKL172W YAL065CO13511 128 aa1.29□□□□□ -2.2
EBP2YKL172W YNL042W-BQ3E7Z2 85 aa1.29□□□□□ -2.2
EBP2YKL172W QCR9P22289 66 aa1.28□□□□□ -2.2
EBP2YKL172W NOP10Q6Q547 58 aaPredicted RBP1.28□□□□□ -2.2
EBP2YKL172W SIN3P22579 1536 aa1.27□□□□□ -2.21
EBP2YKL172W YBR072C-AQ3E794 53 aa1.27□□□□□ -2.21
EBP2YKL172W YFL041W-AQ3E817 63 aa1.27□□□□□ -2.21
EBP2YKL172W YHR173CP38864 112 aa1.26□□□□□ -2.21
EBP2YKL172W YBR201C-AQ2V2Q3 67 aa1.26□□□□□ -2.21
EBP2YKL172W YOR034C-AQ3E735 80 aa1.26□□□□□ -2.21
EBP2YKL172W Q0032Q9ZZX7 96 aa1.26□□□□□ -2.21
EBP2YKL172W SEC16P48415 2195 aaKnown RBP1.25□□□□□ -2.21
EBP2YKL172W TY4B-HP0C2J7 1802 aa1.25□□□□□ -2.21
EBP2YKL172W COX7P10174 60 aa1.25□□□□□ -2.21
EBP2YKL172W YIL156W-BQ2V2P4 73 aa1.25□□□□□ -2.21
EBP2YKL172W YMR122W-AQ3E842 84 aa1.25□□□□□ -2.21
EBP2YKL172W UFD4P33202 1483 aa1.24□□□□□ -2.21
EBP2YKL172W TIM12P32830 109 aa1.24□□□□□ -2.21
EBP2YKL172W SSS1P35179 80 aa1.24□□□□□ -2.21
EBP2YKL172W ATP18P81450 59 aa1.24□□□□□ -2.21
EBP2YKL172W YOL097W-AQ3E7Y9 61 aa1.24□□□□□ -2.21
EBP2YKL172W YGR121W-AQ3E816 71 aa1.24□□□□□ -2.21
EBP2YKL172W XRN1P22147 1528 aaKnown RBP1.24□□□□□ -2.21
EBP2YKL172W DOP1Q03921 1698 aa1.23□□□□□ -2.21
EBP2YKL172W PAU7P39545 55 aa1.23□□□□□ -2.21
EBP2YKL172W RPL38P49167 78 aaKnown RBP1.23□□□□□ -2.21
EBP2YKL172W SGF11Q03067 99 aa1.23□□□□□ -2.21
EBP2YKL172W SMC4Q12267 1418 aa1.23□□□□□ -2.21
EBP2YKL172W FAS2P19097 1887 aaKnown RBP1.22□□□□□ -2.21
EBP2YKL172W TCB3Q03640 1545 aaKnown RBP1.22□□□□□ -2.21
EBP2YKL172W YOL131WQ08270 108 aa1.22□□□□□ -2.21
EBP2YKL172W SCC2Q04002 1493 aa1.22□□□□□ -2.21
EBP2YKL172W ECM29P38737 1868 aa1.22□□□□□ -2.21
EBP2YKL172W TY1B-DR1Q03855 1755 aa1.21□□□□□ -2.22
EBP2YKL172W TY1B-DR3Q99231 1755 aa1.21□□□□□ -2.22
EBP2YKL172W MOT1P32333 1867 aa1.21□□□□□ -2.22
EBP2YKL172W YFR010W-AP0C5N0 62 aa1.21□□□□□ -2.22
EBP2YKL172W RPL43AP0CX25 92 aaKnown RBP1.21□□□□□ -2.22
EBP2YKL172W RPL43BP0CX26 92 aa1.21□□□□□ -2.22
EBP2YKL172W YNL198CP40166 100 aa1.21□□□□□ -2.22
EBP2YKL172W YGR035W-AQ45U48 73 aa1.21□□□□□ -2.22
EBP2YKL172W POL2P21951 2222 aaKnown RBP1.21□□□□□ -2.22
EBP2YKL172W SPI1P40092 148 aa1.2□□□□□ -2.22
EBP2YKL172W SDH6Q3E785 79 aa1.2□□□□□ -2.22
EBP2YKL172W RPO31P04051 1460 aa1.19□□□□□ -2.22
EBP2YKL172W TY1B-LR3P0C2I6 1755 aaKnown RBP1.19□□□□□ -2.22
EBP2YKL172W TY1B-PR3P0C2J1 1755 aaKnown RBP1.19□□□□□ -2.22
EBP2YKL172W VMA9Q3E7B6 73 aa1.19□□□□□ -2.22
EBP2YKL172W YDL022C-AP0C5L6 82 aa1.18□□□□□ -2.22
EBP2YKL172W YSY6P38374 65 aa1.18□□□□□ -2.22
EBP2YKL172W RPC10P40422 70 aa1.18□□□□□ -2.22
EBP2YKL172W ATP17Q06405 101 aa1.18□□□□□ -2.22
EBP2YKL172W YIL102C-AQ2V2P5 75 aa1.18□□□□□ -2.22
EBP2YKL172W MYO4P32492 1471 aa1.18□□□□□ -2.22
EBP2YKL172W IQG1Q12280 1495 aa1.18□□□□□ -2.22
EBP2YKL172W URA2P07259 2214 aaKnown RBP1.17□□□□□ -2.22
EBP2YKL172W STT4P37297 1900 aa1.17□□□□□ -2.22
EBP2YKL172W UTP10P42945 1769 aaKnown RBP1.17□□□□□ -2.22
EBP2YKL172W YJR107C-AP0CT86 78 aa1.17□□□□□ -2.22
EBP2YKL172W AUA1P32450 94 aa1.17□□□□□ -2.22
EBP2YKL172W ERI1P62651 68 aaKnown RBP1.17□□□□□ -2.22
EBP2YKL172W YPR108W-AQ3E7B3 70 aa1.17□□□□□ -2.22
EBP2YKL172W HUB1Q6Q546 73 aa1.17□□□□□ -2.22
EBP2YKL172W VPS15P22219 1454 aa1.17□□□□□ -2.22
EBP2YKL172W DNF3Q12674 1656 aa1.16□□□□□ -2.22
EBP2YKL172W YBR032WP38223 100 aa1.16□□□□□ -2.22
EBP2YKL172W YLR307C-AQ3E825 87 aa1.16□□□□□ -2.22
EBP2YKL172W BLM10P43583 2143 aa1.16□□□□□ -2.22
EBP2YKL172W YLR157W-EP0CF00 54 aa1.15□□□□□ -2.23
EBP2YKL172W YKL018C-AQ3E7A7 99 aa1.15□□□□□ -2.23
EBP2YKL172W IML1P47170 1584 aa1.15□□□□□ -2.23
EBP2YKL172W TY2B-CP25384 1770 aa1.15□□□□□ -2.23
EBP2YKL172W TY2B-DR1Q12472 1770 aa1.15□□□□□ -2.23
EBP2YKL172W TY1B-BLQ12490 1755 aa1.15□□□□□ -2.23
EBP2YKL172W BPH1P25356 2167 aa1.15□□□□□ -2.23
EBP2YKL172W YLR146W-AQ2V2P1 62 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms