RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W OST5Q92316 86 aa2.68□□□□□ -1.98
NSP1YJL041W YEL067CP39978 195 aa2.67□□□□□ -1.98
NSP1YJL041W NRM1P53718 249 aa2.67□□□□□ -1.98
NSP1YJL041W YOR381W-AQ3E804 55 aa2.67□□□□□ -1.98
NSP1YJL041W HUB1Q6Q546 73 aa2.67□□□□□ -1.98
NSP1YJL041W YER188C-AP0C0V2 99 aa2.67□□□□□ -1.98
NSP1YJL041W FYV5P25585 152 aa2.67□□□□□ -1.98
NSP1YJL041W YOR008C-AQ3E7B9 74 aa2.67□□□□□ -1.98
NSP1YJL041W YGR035W-AQ45U48 73 aa2.67□□□□□ -1.98
NSP1YJL041W YLR236CA0A023PZG4 107 aa2.66□□□□□ -1.98
NSP1YJL041W HSP150P32478 413 aa2.66□□□□□ -1.98
NSP1YJL041W SHU1P38751 150 aa2.66□□□□□ -1.98
NSP1YJL041W MRPS8Q03799 155 aa2.66□□□□□ -1.98
NSP1YJL041W YLR285C-AQ3E771 56 aa2.66□□□□□ -1.98
NSP1YJL041W HMRA2P0CY13 119 aa2.65□□□□□ -1.98
NSP1YJL041W MRPS12P53732 153 aa2.65□□□□□ -1.98
NSP1YJL041W ERI1P62651 68 aaKnown RBP2.65□□□□□ -1.98
NSP1YJL041W YLR111WQ12528 110 aa2.65□□□□□ -1.98
NSP1YJL041W YLR156WP0CE96 114 aa2.65□□□□□ -1.99
NSP1YJL041W YLR159WP0CE97 114 aa2.65□□□□□ -1.99
NSP1YJL041W YLR161WP0CE98 114 aa2.65□□□□□ -1.99
NSP1YJL041W RPS23AP0CX29 145 aaKnown RBP2.65□□□□□ -1.99
NSP1YJL041W RPS23BP0CX30 145 aa2.65□□□□□ -1.99
NSP1YJL041W RPL26BP53221 127 aaKnown RBP2.65□□□□□ -1.99
NSP1YJL041W YOL014WQ08110 124 aa2.65□□□□□ -1.99
NSP1YJL041W VPS68Q12016 184 aa2.65□□□□□ -1.99
NSP1YJL041W YKR032WP36127 104 aa2.64□□□□□ -1.99
NSP1YJL041W DAD4P69851 72 aa2.64□□□□□ -1.99
NSP1YJL041W YMR244WQ04018 355 aa2.64□□□□□ -1.99
NSP1YJL041W QCR10P37299 77 aa2.64□□□□□ -1.99
NSP1YJL041W RGM1Q00453 211 aa2.64□□□□□ -1.99
NSP1YJL041W NCE101Q02820 53 aa2.64□□□□□ -1.99
NSP1YJL041W LIP1Q03579 150 aa2.64□□□□□ -1.99
NSP1YJL041W YMR122CQ03879 124 aa2.64□□□□□ -1.99
NSP1YJL041W NAG1Q8TGN9 163 aa2.64□□□□□ -1.99
NSP1YJL041W YNL162W-AQ3E7A8 72 aa2.63□□□□□ -1.99
NSP1YJL041W RRT15Q3E811 62 aa2.63□□□□□ -1.99
NSP1YJL041W YJL197C-AP0C5P0 93 aa2.63□□□□□ -1.99
NSP1YJL041W YBL071CP38185 102 aa2.63□□□□□ -1.99
NSP1YJL041W REE1P40893 198 aa2.63□□□□□ -1.99
NSP1YJL041W YCL048W-AQ2V2Q2 79 aa2.63□□□□□ -1.99
NSP1YJL041W YBL008W-AQ3E821 79 aa2.63□□□□□ -1.99
NSP1YJL041W YOL166W-AQ8TGJ1 51 aa2.63□□□□□ -1.99
NSP1YJL041W CCH1P50077 2039 aa2.62□□□□□ -1.99
NSP1YJL041W RPL15AP05748 204 aaKnown RBP2.62□□□□□ -1.99
NSP1YJL041W YJR107C-AP0CT86 78 aa2.62□□□□□ -1.99
NSP1YJL041W YBL081WP38180 368 aaKnown RBP2.62□□□□□ -1.99
NSP1YJL041W VTC1P40046 129 aaRIP-Chip data2.62□□□□□ -1.99not detected
NSP1YJL041W ARC15P40518 154 aaRIP-Chip data2.62□□□□□ -1.99not detected
NSP1YJL041W YGL149WP53116 101 aa2.62□□□□□ -1.99
NSP1YJL041W RPL15BP54780 204 aaPredicted RBP2.62□□□□□ -1.99
NSP1YJL041W ATP18P81450 59 aa2.62□□□□□ -1.99
NSP1YJL041W RRT1P38192 103 aa2.61□□□□□ -1.99
NSP1YJL041W YER145C-AA0A023PYF4 145 aa2.61□□□□□ -1.99
NSP1YJL041W YAR023CD6VPM8 179 aa2.61□□□□□ -1.99
NSP1YJL041W DDR48P18899 430 aaKnown RBP2.61□□□□□ -1.99
NSP1YJL041W TVP23P38962 199 aa2.61□□□□□ -1.99
NSP1YJL041W YAL064WP39711 94 aa2.61□□□□□ -1.99
NSP1YJL041W YCR001WP25347 104 aa2.6□□□□□ -1.99
NSP1YJL041W YCR022CP25620 114 aa2.6□□□□□ -1.99
NSP1YJL041W YMR141CP40211 102 aa2.6□□□□□ -1.99
NSP1YJL041W TOM7P53507 60 aa2.6□□□□□ -1.99
NSP1YJL041W WWM1P43582 211 aaKnown RBP2.6□□□□□ -1.99
NSP1YJL041W SED1Q01589 338 aa2.6□□□□□ -1.99
NSP1YJL041W YJR146WP47174 117 aa2.59□□□□□ -1.99
NSP1YJL041W SOM1Q05676 74 aa2.59□□□□□ -1.99
NSP1YJL041W YOR268CQ08734 132 aa2.59□□□□□ -1.99
NSP1YJL041W YOR376W-AQ3E805 51 aa2.59□□□□□ -1.99
NSP1YJL041W YPR153WQ06537 140 aa2.59□□□□□ -2
NSP1YJL041W EDC2P40023 145 aaPredicted RBP2.58□□□□□ -2
NSP1YJL041W RPR2P40571 144 aa2.58□□□□□ -2
NSP1YJL041W YLR307C-AQ3E825 87 aa2.58□□□□□ -2
NSP1YJL041W NOP10Q6Q547 58 aaPredicted RBP2.58□□□□□ -2
NSP1YJL041W YFR032C-BQ8TGU2 87 aa2.58□□□□□ -2
NSP1YJL041W MRX7P53869 86 aa2.58□□□□□ -2
NSP1YJL041W YIR020CP40575 100 aa2.57□□□□□ -2
NSP1YJL041W YMR321CQ04898 105 aa2.57□□□□□ -2
NSP1YJL041W ATP17Q06405 101 aa2.57□□□□□ -2
NSP1YJL041W YSF3P0C074 85 aaPredicted RBP2.57□□□□□ -2
NSP1YJL041W NCE102Q12207 173 aaRIP-Chip data2.57□□□□□ -2not detected
NSP1YJL041W RPL29P05747 59 aaPredicted RBP2.56□□□□□ -2
NSP1YJL041W RPS30AP0CX33 63 aaKnown RBP2.56□□□□□ -2
NSP1YJL041W RPS30BP0CX34 63 aaKnown RBP2.56□□□□□ -2
NSP1YJL041W ATP15P21306 62 aa2.56□□□□□ -2
NSP1YJL041W BSC4P53841 131 aa2.56□□□□□ -2
NSP1YJL041W COX23P38824 151 aa2.55□□□□□ -2
NSP1YJL041W RPC11Q04307 110 aaPredicted RBP2.55□□□□□ -2
NSP1YJL041W SNA2P56508 79 aa2.54□□□□□ -2
NSP1YJL041W CCW12Q12127 133 aa2.54□□□□□ -2
NSP1YJL041W YCR095W-AQ3E787 52 aa2.54□□□□□ -2
NSP1YJL041W YPL278CQ08990 100 aa2.54□□□□□ -2
NSP1YJL041W POR2P40478 281 aa2.53□□□□□ -2
NSP1YJL041W YOR192C-CQ3E736 78 aa2.53□□□□□ -2
NSP1YJL041W KRE9P39005 276 aa2.53□□□□□ -2
NSP1YJL041W YDL241WQ07738 123 aa2.53□□□□□ -2
NSP1YJL041W YPR013CQ12145 317 aa2.53□□□□□ -2
NSP1YJL041W SDH6Q3E785 79 aa2.53□□□□□ -2
NSP1YJL041W RPS11AP0CX47 156 aaKnown RBP2.52□□□□□ -2.01
NSP1YJL041W RPS11BP0CX48 156 aaKnown RBP2.52□□□□□ -2.01
NSP1YJL041W API2Q04413 109 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms