RNA–Protein interactions for RNA: YHR053C

CUP1-1, Transcript of Metallothionein, yeastyeast

Gene CUP1-1, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-1YHR053C RGI1P40043 161 aaPredicted RBP-1.22□□□□□ -2.6
CUP1-1YHR053C RSM19P53733 91 aaPredicted RBP-1.22□□□□□ -2.6
CUP1-1YHR053C MMS1Q06211 1407 aa-1.23□□□□□ -2.61
CUP1-1YHR053C YBR090CP38253 122 aa-1.25□□□□□ -2.61
CUP1-1YHR053C SPC1P46965 94 aa-1.25□□□□□ -2.61
CUP1-1YHR053C NHP10Q03435 203 aa-1.25□□□□□ -2.61
CUP1-1YHR053C YBL044WP38194 122 aa-1.26□□□□□ -2.61
CUP1-1YHR053C EMC5P40540 141 aa-1.26□□□□□ -2.61
CUP1-1YHR053C TOR1P35169 2470 aa-1.26□□□□□ -2.61
CUP1-1YHR053C TY1B-PR2P0C2J0 1756 aa-1.27□□□□□ -2.61
CUP1-1YHR053C YHR050W-AQ05451 56 aa-1.28□□□□□ -2.61
CUP1-1YHR053C YBR201C-AQ2V2Q3 67 aa-1.28□□□□□ -2.61
CUP1-1YHR053C BPH1P25356 2167 aa-1.29□□□□□ -2.62
CUP1-1YHR053C TOM6P33448 61 aa-1.29□□□□□ -2.62
CUP1-1YHR053C EDC1P53080 175 aaPredicted RBP-1.29□□□□□ -2.62
CUP1-1YHR053C YPR117WQ06116 2489 aa-1.3□□□□□ -2.62
CUP1-1YHR053C YOR289WQ12012 251 aaPredicted RBP-1.3□□□□□ -2.62
CUP1-1YHR053C GEA1P47102 1408 aaPredicted RBP-1.31□□□□□ -2.62
CUP1-1YHR053C LHP1P33399 275 aaKnown RBP-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-DR5P0C2I2 1755 aa-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-DR6P0C2I3 1755 aa-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-LR2P0C2I5 1755 aa-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-PR1P0C2I9 1755 aaKnown RBP-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-JR1P47098 1755 aa-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-JR2P47100 1755 aaKnown RBP-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-ML2Q03434 1755 aaKnown RBP-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-ER1Q03612 1755 aa-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-DR1Q03855 1755 aa-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-MR2Q04670 1755 aaKnown RBP-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-ML1Q04711 1755 aaKnown RBP-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-GR1Q12141 1755 aa-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-GR2Q12269 1755 aa-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-OLQ12273 1755 aa-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-PLQ12414 1755 aaKnown RBP-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-ORQ92393 1755 aa-1.32□□□□□ -2.62
CUP1-1YHR053C TY1B-DR3Q99231 1755 aa-1.32□□□□□ -2.62
CUP1-1YHR053C SDH6Q3E785 79 aa-1.33□□□□□ -2.62
CUP1-1YHR053C TSC11P40061 1430 aa-1.34□□□□□ -2.62
CUP1-1YHR053C FMP27Q06179 2628 aa-1.35□□□□□ -2.62
CUP1-1YHR053C HMRA1P0CY11 126 aa-1.35□□□□□ -2.63
CUP1-1YHR053C YDR182W-AQ3E796 67 aa-1.35□□□□□ -2.63
CUP1-1YHR053C RPS12P48589 143 aaKnown RBP-1.36□□□□□ -2.63
CUP1-1YHR053C KSH1Q8TGJ3 72 aa-1.36□□□□□ -2.63
CUP1-1YHR053C YOR008C-AQ3E7B9 74 aa-1.37□□□□□ -2.63
CUP1-1YHR053C TY1B-MR1Q04214 1755 aa-1.37□□□□□ -2.63
CUP1-1YHR053C TY1B-NL1Q12112 1755 aa-1.37□□□□□ -2.63
CUP1-1YHR053C TY1B-GR3Q12316 1755 aa-1.37□□□□□ -2.63
CUP1-1YHR053C YBR032WP38223 100 aa-1.38□□□□□ -2.63
CUP1-1YHR053C YKL018C-AQ3E7A7 99 aa-1.38□□□□□ -2.63
CUP1-1YHR053C MDN1Q12019 4910 aaKnown RBP-1.39□□□□□ -2.63
CUP1-1YHR053C YCR085WP25650 117 aa-1.4□□□□□ -2.63
CUP1-1YHR053C SNU13P39990 126 aaKnown RBP-1.4□□□□□ -2.63
CUP1-1YHR053C BSC4P53841 131 aa-1.4□□□□□ -2.63
CUP1-1YHR053C TY2B-LR1P0C2J3 1770 aa-1.4□□□□□ -2.63
CUP1-1YHR053C TY2B-FP0CX63 1770 aa-1.4□□□□□ -2.63
CUP1-1YHR053C TY2B-GR2P0CX64 1770 aa-1.4□□□□□ -2.63
CUP1-1YHR053C TY2B-CP25384 1770 aa-1.4□□□□□ -2.63
CUP1-1YHR053C TY2B-DR2Q03494 1770 aa-1.4□□□□□ -2.63
CUP1-1YHR053C TY2B-DR3Q07791 1770 aaKnown RBP-1.4□□□□□ -2.63
CUP1-1YHR053C TY2B-OR1Q12113 1770 aa-1.4□□□□□ -2.63
CUP1-1YHR053C TY2B-DR1Q12472 1770 aa-1.4□□□□□ -2.63
CUP1-1YHR053C TY2B-BQ12491 1770 aa-1.4□□□□□ -2.63
CUP1-1YHR053C TY2B-OR2Q12501 1770 aa-1.4□□□□□ -2.63
CUP1-1YHR053C PDR11P40550 1411 aa-1.4□□□□□ -2.63
CUP1-1YHR053C YHR214C-DP0CX93 97 aa-1.41□□□□□ -2.64
CUP1-1YHR053C ATP18P81450 59 aa-1.41□□□□□ -2.64
CUP1-1YHR053C TOR2P32600 2474 aaKnown RBP-1.41□□□□□ -2.64
CUP1-1YHR053C TEL1P38110 2787 aa-1.42□□□□□ -2.64
CUP1-1YHR053C TY1B-NL2Q99337 1749 aaKnown RBP-1.42□□□□□ -2.64
CUP1-1YHR053C YMR122W-AQ3E842 84 aa-1.42□□□□□ -2.64
CUP1-1YHR053C VTH1P40438 1549 aa-1.42□□□□□ -2.64
CUP1-1YHR053C VTH2P40890 1549 aa-1.42□□□□□ -2.64
CUP1-1YHR053C YPR108W-AQ3E7B3 70 aa-1.43□□□□□ -2.64
CUP1-1YHR053C SPO14P36126 1683 aa-1.45□□□□□ -2.64
CUP1-1YHR053C NHP2P32495 156 aaPredicted RBP-1.45□□□□□ -2.64
CUP1-1YHR053C TY1B-ER2Q03619 1755 aa-1.45□□□□□ -2.64
CUP1-1YHR053C TY1B-LR1Q12088 1755 aaKnown RBP-1.45□□□□□ -2.64
CUP1-1YHR053C YAL065CO13511 128 aa-1.46□□□□□ -2.64
CUP1-1YHR053C YOL097W-AQ3E7Y9 61 aa-1.46□□□□□ -2.64
CUP1-1YHR053C GEA2P39993 1459 aaKnown RBP-1.47□□□□□ -2.64
CUP1-1YHR053C YKL068W-AQ3E826 78 aa-1.47□□□□□ -2.64
CUP1-1YHR053C DYN1P36022 4092 aa-1.47□□□□□ -2.64
CUP1-1YHR053C REV3P14284 1504 aa-1.47□□□□□ -2.64
CUP1-1YHR053C STT4P37297 1900 aa-1.48□□□□□ -2.65
CUP1-1YHR053C RPO21P04050 1733 aaKnown RBP-1.48□□□□□ -2.65
CUP1-1YHR053C TOS6P48560 102 aa-1.48□□□□□ -2.65
CUP1-1YHR053C RRT15Q3E811 62 aa-1.48□□□□□ -2.65
CUP1-1YHR053C YER137CP40083 148 aaKnown RBP-1.49□□□□□ -2.65
CUP1-1YHR053C SIP18P50263 79 aa-1.5□□□□□ -2.65
CUP1-1YHR053C YDR029WQ12111 104 aa-1.51□□□□□ -2.65
CUP1-1YHR053C MEC1P38111 2368 aa-1.52□□□□□ -2.65
CUP1-1YHR053C MOT1P32333 1867 aa-1.54□□□□□ -2.66
CUP1-1YHR053C ECM29P38737 1868 aa-1.54□□□□□ -2.66
CUP1-1YHR053C XRN1P22147 1528 aaKnown RBP-1.55□□□□□ -2.66
CUP1-1YHR053C FPR2P32472 135 aa-1.55□□□□□ -2.66
CUP1-1YHR053C OLI1P61829 76 aa-1.55□□□□□ -2.66
CUP1-1YHR053C RPA190P10964 1664 aaKnown RBP-1.55□□□□□ -2.66
CUP1-1YHR053C GCN1P33892 2672 aaKnown RBP-1.57□□□□□ -2.66
CUP1-1YHR053C LSM2P38203 95 aaKnown RBP-1.57□□□□□ -2.66
CUP1-1YHR053C COA2Q3E823 68 aa-1.57□□□□□ -2.66
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms