RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	SCC2	Q04002	1493 aa		1.66	□□□□□ -2.14
RPN5	YDL147W	NUP159	P40477	1460 aa		1.66	□□□□□ -2.14
RPN5	YDL147W	YLR255C	O13574	117 aa		1.66	□□□□□ -2.14
RPN5	YDL147W	COX12	Q01519	83 aa		1.66	□□□□□ -2.14
RPN5	YDL147W	YBR072C-A	Q3E794	53 aa		1.66	□□□□□ -2.14
RPN5	YDL147W	KSH1	Q8TGJ3	72 aa		1.66	□□□□□ -2.14
RPN5	YDL147W	CAT8	P39113	1433 aa		1.65	□□□□□ -2.14
RPN5	YDL147W	PDR11	P40550	1411 aa		1.65	□□□□□ -2.14
RPN5	YDL147W	RPO21	P04050	1733 aa	Known RBP	1.65	□□□□□ -2.15
RPN5	YDL147W	CHC1	P22137	1653 aa	Known RBP	1.65	□□□□□ -2.15
RPN5	YDL147W	GEA2	P39993	1459 aa	Known RBP	1.65	□□□□□ -2.15
RPN5	YDL147W	AUA1	P32450	94 aa		1.65	□□□□□ -2.15
RPN5	YDL147W	SHU1	P38751	150 aa		1.65	□□□□□ -2.15
RPN5	YDL147W	RRP5	Q05022	1729 aa	Known RBP	1.64	□□□□□ -2.15
RPN5	YDL147W	SPO14	P36126	1683 aa		1.64	□□□□□ -2.15
RPN5	YDL147W	SNF2	P22082	1703 aa		1.64	□□□□□ -2.15
RPN5	YDL147W	YDR010C	Q12426	110 aa		1.64	□□□□□ -2.15
RPN5	YDL147W	ARO1	P08566	1588 aa	Known RBP	1.63	□□□□□ -2.15
RPN5	YDL147W	YCR095W-A	Q3E787	52 aa		1.63	□□□□□ -2.15
RPN5	YDL147W	RKR1	Q04781	1562 aa		1.62	□□□□□ -2.15
RPN5	YDL147W	STU1	P38198	1513 aa		1.62	□□□□□ -2.15
RPN5	YDL147W	GCV3	P39726	170 aa	Predicted RBP	1.62	□□□□□ -2.15
RPN5	YDL147W	HIR3	P47171	1648 aa		1.62	□□□□□ -2.15
RPN5	YDL147W	DNF2	Q12675	1612 aa		1.62	□□□□□ -2.15
RPN5	YDL147W	CDC25	P04821	1589 aa		1.61	□□□□□ -2.15
RPN5	YDL147W	ESC1	Q03661	1658 aa	Known RBP	1.61	□□□□□ -2.15
RPN5	YDL147W	MPC2	P38857	129 aa		1.61	□□□□□ -2.15
RPN5	YDL147W	PDR12	Q02785	1511 aa		1.6	□□□□□ -2.15
RPN5	YDL147W	YHR173C	P38864	112 aa		1.6	□□□□□ -2.15
RPN5	YDL147W	TY1B-NL2	Q99337	1749 aa	Known RBP	1.59	□□□□□ -2.15
RPN5	YDL147W	BPT1	P14772	1559 aa		1.59	□□□□□ -2.16
RPN5	YDL147W	KOG1	P38873	1557 aa		1.59	□□□□□ -2.16
RPN5	YDL147W	POL1	P13382	1468 aa		1.59	□□□□□ -2.16
RPN5	YDL147W	YHL005C	P38752	130 aa		1.59	□□□□□ -2.16
RPN5	YDL147W	PAU5	P43575	122 aa		1.59	□□□□□ -2.16
RPN5	YDL147W	RSM19	P53733	91 aa	Predicted RBP	1.59	□□□□□ -2.16
RPN5	YDL147W	SNA2	P56508	79 aa		1.59	□□□□□ -2.16
RPN5	YDL147W	LTE1	P07866	1435 aa		1.58	□□□□□ -2.16
RPN5	YDL147W	MYO1	P08964	1928 aa		1.58	□□□□□ -2.16
RPN5	YDL147W	ROX3	P25046	220 aa		1.58	□□□□□ -2.16
RPN5	YDL147W	SWR1	Q05471	1514 aa		1.58	□□□□□ -2.16
RPN5	YDL147W	USO1	P25386	1790 aa		1.58	□□□□□ -2.16
RPN5	YDL147W	ZEO1	Q08245	113 aa		1.57	□□□□□ -2.16
RPN5	YDL147W	FAS2	P19097	1887 aa	Known RBP	1.56	□□□□□ -2.16
RPN5	YDL147W	PDR15	Q04182	1529 aa	Known RBP	1.56	□□□□□ -2.16
RPN5	YDL147W	TY3B-G	Q99315	1547 aa		1.56	□□□□□ -2.16
RPN5	YDL147W	RPA190	P10964	1664 aa	Known RBP	1.56	□□□□□ -2.16
RPN5	YDL147W	DOP1	Q03921	1698 aa		1.56	□□□□□ -2.16
RPN5	YDL147W	MRP17	P28778	131 aa		1.56	□□□□□ -2.16
RPN5	YDL147W	IML1	P47170	1584 aa		1.55	□□□□□ -2.16
RPN5	YDL147W	NUP188	P52593	1655 aa	Known RBP	1.55	□□□□□ -2.16
RPN5	YDL147W	YRF1-2	P40105	1681 aa		1.54	□□□□□ -2.16
RPN5	YDL147W	EMC5	P40540	141 aa		1.53	□□□□□ -2.16
RPN5	YDL147W	MRX7	P53869	86 aa		1.53	□□□□□ -2.16
RPN5	YDL147W	NHP10	Q03435	203 aa		1.53	□□□□□ -2.16
RPN5	YDL147W	DNF1	P32660	1571 aa		1.53	□□□□□ -2.17
RPN5	YDL147W	HMRA1	P0CY11	126 aa		1.52	□□□□□ -2.17
RPN5	YDL147W	YCL001W-B	Q96VH2	84 aa		1.52	□□□□□ -2.17
RPN5	YDL147W	VTH1	P40438	1549 aa		1.51	□□□□□ -2.17
RPN5	YDL147W	ICY1	Q04329	127 aa		1.51	□□□□□ -2.17
RPN5	YDL147W	DNF3	Q12674	1656 aa		1.51	□□□□□ -2.17
RPN5	YDL147W	VMR1	P38735	1592 aa		1.5	□□□□□ -2.17
RPN5	YDL147W	PAU6	P0CE90	120 aa		1.5	□□□□□ -2.17
RPN5	YDL147W	PAU18	P0CE91	120 aa		1.5	□□□□□ -2.17
RPN5	YDL147W	SCP1	Q08873	200 aa		1.5	□□□□□ -2.17
RPN5	YDL147W	YFR010W-A	P0C5N0	62 aa		1.49	□□□□□ -2.17
RPN5	YDL147W	SNQ2	P32568	1501 aa	Known RBP	1.49	□□□□□ -2.17
RPN5	YDL147W	MRPL38	P35996	138 aa	Predicted RBP	1.48	□□□□□ -2.17
RPN5	YDL147W	VTH2	P40890	1549 aa		1.48	□□□□□ -2.17
RPN5	YDL147W	YBT1	P32386	1661 aa		1.48	□□□□□ -2.17
RPN5	YDL147W	YBR292C	P38357	123 aa		1.47	□□□□□ -2.17
RPN5	YDL147W	AIM19	P40502	157 aa		1.47	□□□□□ -2.17
RPN5	YDL147W	NUP192	P47054	1683 aa		1.47	□□□□□ -2.17
RPN5	YDL147W	YOR093C	Q12275	1648 aa		1.47	□□□□□ -2.17
RPN5	YDL147W	YHR213W-A	Q8TGT4	77 aa		1.47	□□□□□ -2.17
RPN5	YDL147W	FKS3	Q04952	1785 aa		1.47	□□□□□ -2.17
RPN5	YDL147W	BCK1	Q01389	1478 aa		1.46	□□□□□ -2.18
RPN5	YDL147W	RSF2	P46974	1380 aa		1.46	□□□□□ -2.18
RPN5	YDL147W	YGL194C-A	Q2V2P6	80 aa		1.46	□□□□□ -2.18
RPN5	YDL147W	SMX2	P40204	77 aa	Known RBP	1.45	□□□□□ -2.18
RPN5	YDL147W	PAU20	Q08322	120 aa		1.45	□□□□□ -2.18
RPN5	YDL147W	YNR034W-A	Q3E841	98 aa		1.45	□□□□□ -2.18
RPN5	YDL147W	BUD3	P25558	1636 aa		1.45	□□□□□ -2.18
RPN5	YDL147W	MLP1	Q02455	1875 aa	Known RBP	1.45	□□□□□ -2.18
RPN5	YDL147W	RPS11A	P0CX47	156 aa	Known RBP	1.44	□□□□□ -2.18
RPN5	YDL147W	RPS11B	P0CX48	156 aa	Known RBP	1.44	□□□□□ -2.18
RPN5	YDL147W	YBL071C	P38185	102 aa		1.44	□□□□□ -2.18
RPN5	YDL147W	MSL1	P40567	111 aa	Predicted RBP	1.44	□□□□□ -2.18
RPN5	YDL147W	RPS29B	P41058	56 aa	Known RBP	1.44	□□□□□ -2.18
RPN5	YDL147W	YOL164W-A	Q3E7A5	60 aa		1.44	□□□□□ -2.18
RPN5	YDL147W	YBR032W	P38223	100 aa		1.43	□□□□□ -2.18
RPN5	YDL147W	YPR145C-A	Q2V2P0	78 aa		1.42	□□□□□ -2.18
RPN5	YDL147W	PDX3	P38075	228 aa	Known RBP	1.41	□□□□□ -2.18
RPN5	YDL147W	RRT15	Q3E811	62 aa		1.41	□□□□□ -2.18
RPN5	YDL147W	YCR075W-A	Q3E830	75 aa		1.41	□□□□□ -2.18
RPN5	YDL147W	YRF1-1	P0CX20	1796 aa		1.41	□□□□□ -2.18
RPN5	YDL147W	YRF1-5	P0CX21	1796 aa		1.41	□□□□□ -2.18
RPN5	YDL147W	YRF1-8	P0CX22	1796 aa		1.41	□□□□□ -2.18
RPN5	YDL147W	PAU1	P0CE88	120 aa		1.4	□□□□□ -2.18
RPN5	YDL147W	PAU14	P0CE89	120 aa		1.4	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms