RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C YRF1-8P0CX22 1796 aa1.02□□□□□ -2.25
RTG3YBL103C YBR072C-AQ3E794 53 aa1.01□□□□□ -2.25
RTG3YBL103C YLR307C-AQ3E825 87 aa1.01□□□□□ -2.25
RTG3YBL103C BRR2P32639 2163 aaKnown RBP1.01□□□□□ -2.25
RTG3YBL103C YOR343CQ12484 108 aa1□□□□□ -2.25
RTG3YBL103C YLR157W-EP0CF00 54 aa0.99□□□□□ -2.25
RTG3YBL103C ESP1Q03018 1630 aa0.99□□□□□ -2.25
RTG3YBL103C YHR173CP38864 112 aa0.99□□□□□ -2.25
RTG3YBL103C YDR010CQ12426 110 aa0.99□□□□□ -2.25
RTG3YBL103C TY4B-HP0C2J7 1802 aa0.98□□□□□ -2.25
RTG3YBL103C TOM6P33448 61 aa0.98□□□□□ -2.25
RTG3YBL103C YNL042W-BQ3E7Z2 85 aa0.98□□□□□ -2.25
RTG3YBL103C YHR214C-DP0CX93 97 aa0.97□□□□□ -2.25
RTG3YBL103C URA2P07259 2214 aaKnown RBP0.96□□□□□ -2.26
RTG3YBL103C YRF1-2P40105 1681 aa0.95□□□□□ -2.26
RTG3YBL103C XRN1P22147 1528 aaKnown RBP0.95□□□□□ -2.26
RTG3YBL103C POL2P21951 2222 aaKnown RBP0.95□□□□□ -2.26
RTG3YBL103C YAL065CO13511 128 aa0.94□□□□□ -2.26
RTG3YBL103C PDX3P38075 228 aaKnown RBP0.94□□□□□ -2.26
RTG3YBL103C YPR145C-AQ2V2P0 78 aa0.94□□□□□ -2.26
RTG3YBL103C YMR122W-AQ3E842 84 aa0.94□□□□□ -2.26
RTG3YBL103C MMS22Q06164 1454 aa0.94□□□□□ -2.26
RTG3YBL103C DNF3Q12674 1656 aa0.93□□□□□ -2.26
RTG3YBL103C FPR2P32472 135 aa0.93□□□□□ -2.26
RTG3YBL103C PAU23Q07987 124 aa0.93□□□□□ -2.26
RTG3YBL103C PAU17Q12370 124 aa0.93□□□□□ -2.26
RTG3YBL103C YKL065W-AQ2V2P2 73 aa0.93□□□□□ -2.26
RTG3YBL103C YBR201C-AQ2V2Q3 67 aa0.93□□□□□ -2.26
RTG3YBL103C YDR381C-AQ3E6R5 114 aa0.93□□□□□ -2.26
RTG3YBL103C NOP10Q6Q547 58 aaPredicted RBP0.93□□□□□ -2.26
RTG3YBL103C Q0032Q9ZZX7 96 aa0.93□□□□□ -2.26
RTG3YBL103C COX7P10174 60 aa0.92□□□□□ -2.26
RTG3YBL103C YOR314WQ12506 109 aa0.92□□□□□ -2.26
RTG3YBL103C YIL156W-BQ2V2P4 73 aa0.92□□□□□ -2.26
RTG3YBL103C TY1B-PR2P0C2J0 1756 aa0.92□□□□□ -2.26
RTG3YBL103C YNL190WP53872 204 aa0.92□□□□□ -2.26
RTG3YBL103C YOR105WQ08504 108 aa0.92□□□□□ -2.26
RTG3YBL103C YDR119W-AQ2V2P9 66 aa0.91□□□□□ -2.26
RTG3YBL103C YHR213W-AQ8TGT4 77 aa0.91□□□□□ -2.26
RTG3YBL103C RPC10P40422 70 aa0.9□□□□□ -2.27
RTG3YBL103C RIM15P43565 1770 aa0.89□□□□□ -2.27
RTG3YBL103C TY1B-BLQ12490 1755 aa0.89□□□□□ -2.27
RTG3YBL103C SWM2P40342 146 aa0.89□□□□□ -2.27
RTG3YBL103C TY1B-BRQ12193 1756 aa0.89□□□□□ -2.27
RTG3YBL103C RPL38P49167 78 aaKnown RBP0.88□□□□□ -2.27
RTG3YBL103C ATP18P81450 59 aa0.88□□□□□ -2.27
RTG3YBL103C YOL164W-AQ3E7A5 60 aa0.88□□□□□ -2.27
RTG3YBL103C NUP159P40477 1460 aa0.87□□□□□ -2.27
RTG3YBL103C NUM1Q00402 2748 aa0.87□□□□□ -2.27
RTG3YBL103C YGR121W-AQ3E816 71 aa0.87□□□□□ -2.27
RTG3YBL103C TY1B-NL2Q99337 1749 aaKnown RBP0.87□□□□□ -2.27
RTG3YBL103C MLP1Q02455 1875 aaKnown RBP0.86□□□□□ -2.27
RTG3YBL103C LSM2P38203 95 aaKnown RBP0.86□□□□□ -2.27
RTG3YBL103C YNL198CP40166 100 aa0.86□□□□□ -2.27
RTG3YBL103C YDL022C-AP0C5L6 82 aa0.85□□□□□ -2.27
RTG3YBL103C ECM29P38737 1868 aa0.85□□□□□ -2.27
RTG3YBL103C YJR107C-AP0CT86 78 aa0.84□□□□□ -2.28
RTG3YBL103C QCR9P22289 66 aa0.84□□□□□ -2.28
RTG3YBL103C YOL097W-AQ3E7Y9 61 aa0.84□□□□□ -2.28
RTG3YBL103C UTP10P42945 1769 aaKnown RBP0.84□□□□□ -2.28
RTG3YBL103C SNF2P22082 1703 aa0.84□□□□□ -2.28
RTG3YBL103C SIN3P22579 1536 aa0.83□□□□□ -2.28
RTG3YBL103C YGR035W-AQ45U48 73 aa0.83□□□□□ -2.28
RTG3YBL103C SDH6Q3E785 79 aa0.82□□□□□ -2.28
RTG3YBL103C TY1B-DR6P0C2I3 1755 aa0.82□□□□□ -2.28
RTG3YBL103C TY1B-LR2P0C2I5 1755 aa0.82□□□□□ -2.28
RTG3YBL103C TY1B-LR3P0C2I6 1755 aaKnown RBP0.82□□□□□ -2.28
RTG3YBL103C TY1B-PR3P0C2J1 1755 aaKnown RBP0.82□□□□□ -2.28
RTG3YBL103C TY1B-JR2P47100 1755 aaKnown RBP0.82□□□□□ -2.28
RTG3YBL103C TY1B-MR1Q04214 1755 aa0.82□□□□□ -2.28
RTG3YBL103C TY1B-MR2Q04670 1755 aaKnown RBP0.82□□□□□ -2.28
RTG3YBL103C TY1B-NL1Q12112 1755 aa0.82□□□□□ -2.28
RTG3YBL103C TY1B-GR1Q12141 1755 aa0.82□□□□□ -2.28
RTG3YBL103C TY1B-GR3Q12316 1755 aa0.82□□□□□ -2.28
RTG3YBL103C TY1B-PLQ12414 1755 aaKnown RBP0.82□□□□□ -2.28
RTG3YBL103C TY1B-ORQ92393 1755 aa0.82□□□□□ -2.28
RTG3YBL103C MOT1P32333 1867 aa0.82□□□□□ -2.28
RTG3YBL103C SGF11Q03067 99 aa0.81□□□□□ -2.28
RTG3YBL103C DOP1Q03921 1698 aa0.81□□□□□ -2.28
RTG3YBL103C PAI3P01094 68 aa0.8□□□□□ -2.28
RTG3YBL103C TIM12P32830 109 aa0.8□□□□□ -2.28
RTG3YBL103C RPS29BP41058 56 aaKnown RBP0.8□□□□□ -2.28
RTG3YBL103C UFD4P33202 1483 aa0.8□□□□□ -2.28
RTG3YBL103C YBR016WP38216 128 aa0.8□□□□□ -2.28
RTG3YBL103C YPR108W-AQ3E7B3 70 aa0.8□□□□□ -2.28
RTG3YBL103C TY2B-CP25384 1770 aa0.79□□□□□ -2.28
RTG3YBL103C TY2B-DR1Q12472 1770 aa0.79□□□□□ -2.28
RTG3YBL103C TY1B-DR5P0C2I2 1755 aa0.79□□□□□ -2.28
RTG3YBL103C TY1B-PR1P0C2I9 1755 aaKnown RBP0.79□□□□□ -2.28
RTG3YBL103C TY1B-ER2Q03619 1755 aa0.79□□□□□ -2.28
RTG3YBL103C TY1B-DR1Q03855 1755 aa0.79□□□□□ -2.28
RTG3YBL103C TY1B-ML1Q04711 1755 aaKnown RBP0.79□□□□□ -2.28
RTG3YBL103C TY1B-LR1Q12088 1755 aaKnown RBP0.79□□□□□ -2.28
RTG3YBL103C TY1B-GR2Q12269 1755 aa0.79□□□□□ -2.28
RTG3YBL103C TY1B-DR3Q99231 1755 aa0.79□□□□□ -2.28
RTG3YBL103C MON2P48563 1636 aaPredicted RBP0.78□□□□□ -2.28
RTG3YBL103C YFL041W-AQ3E817 63 aa0.78□□□□□ -2.28
RTG3YBL103C FAS2P19097 1887 aaKnown RBP0.78□□□□□ -2.29
RTG3YBL103C STT4P37297 1900 aa0.77□□□□□ -2.29
RTG3YBL103C YBR032WP38223 100 aa0.77□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 82.5 ms