RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 XIRP2A4UGR9 3374 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 C2orf16Q68DN1 1984 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 A0A1W2PQJ5 194 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 C2CD4DB7Z1M9 353 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 PIK3R2O00459 728 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 RTN3O95197 1032 aaPredicted RBP13.93□□□□□ -0.18
GTF3A-209ENST00000640289 MMEP08473 750 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 SETSIPP0DME0 302 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 YWHAQP27348 245 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 CASP14P31944 242 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 GBP2P32456 591 aaPredicted RBP13.93□□□□□ -0.18
GTF3A-209ENST00000640289 KRT9P35527 623 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 PLA2G4AP47712 749 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 ZNF75DP51815 510 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 KIF11P52732 1056 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 SLC8A3P57103 927 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 TAF10Q12962 218 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 SPECC1LQ69YQ0 1117 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 WDTC1Q8N5D0 677 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 LEMD2Q8NC56 503 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 ST13P5Q8NFI4 369 aaPredicted RBP13.93□□□□□ -0.18
GTF3A-209ENST00000640289 FBXO32Q969P5 355 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 MCRS1Q96EZ8 462 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 EDEM3Q9BZQ6 932 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 UBXN6Q9BZV1 441 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 PNPLA8Q9NP80 782 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 IL37Q9NZH6 218 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 UXTQ9UBK9 157 aaPredicted RBP13.93□□□□□ -0.18
GTF3A-209ENST00000640289 NOCTQ9UK39 431 aaKnown RBP13.93□□□□□ -0.18
GTF3A-209ENST00000640289 MYO6Q9UM54 1294 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 PCDHGC3Q9UN70 934 aa13.93□□□□□ -0.18
GTF3A-209ENST00000640289 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.93□□□□□ -0.189e-8■□□□□ 8.8
GTF3A-209ENST00000640289 ZNF197O14709 1029 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 GABBR2O75899 941 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 LCP1P13796 627 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 FERP16591 822 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 CHRNB2P17787 502 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 CDC25CP30307 473 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 PGFP49763 221 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 TKTL1P51854 596 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 GOLGA8FQ08AF8 430 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 GOLGA8DPQ0D2H9 430 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 MEA1Q16626 185 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 RAB41Q5JT25 222 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 SFMBT2Q5VUG0 894 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 TMC6Q7Z403 805 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 IRF2BP2Q7Z5L9 587 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 NPAS3Q8IXF0 933 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 C1orf131Q8NDD1 294 aaKnown RBP13.92□□□□□ -0.18
GTF3A-209ENST00000640289 FGF13Q92913 245 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 PDCL3Q9H2J4 239 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 GMIPQ9P107 970 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 CHORDC1Q9UHD1 332 aaPredicted RBP13.92□□□□□ -0.18
GTF3A-209ENST00000640289 CAPN11Q9UMQ6 739 aa13.92□□□□□ -0.18
GTF3A-209ENST00000640289 COL6A3P12111 3177 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 FAM92AA1XBS5 289 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 FGF19O95750 216 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 ZBED6P86452 979 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 FMO1Q01740 532 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 CDR2Q01850 454 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 ZP2Q05996 745 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 ADIGQ0VDE8 80 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 ASIC2Q16515 512 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 TXNDC8Q6A555 127 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 ADHFE1Q8IWW8 467 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 TDRD5Q8NAT2 981 aaKnown RBP13.91□□□□□ -0.18
GTF3A-209ENST00000640289 CLEC4CQ8WTT0 213 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 KCTD13Q8WZ19 329 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 NDRG1Q92597 394 aaKnown RBP13.91□□□□□ -0.18
GTF3A-209ENST00000640289 IQCDQ96DY2 449 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 MRFAP1L1Q96HT8 127 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 ZSWIM3Q96MP5 696 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 SLITRK1Q96PX8 696 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 GCNAQ96QF7 691 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 ULBP1Q9BZM6 244 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 LHX5Q9H2C1 402 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 FBXO44Q9H4M3 255 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 LRRC4Q9HBW1 653 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 ST7Q9NRC1 585 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 COMMD8Q9NX08 183 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.91□□□□□ -0.18
GTF3A-209ENST00000640289 EHD2Q9NZN4 543 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 TRPM5Q9NZQ8 1165 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 TJP2Q9UDY2 1190 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 CDH7Q9ULB5 785 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 LUC7L2Q9Y383 392 aaKnown RBP13.91□□□□□ -0.18
GTF3A-209ENST00000640289 USP3Q9Y6I4 520 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 BRWD1Q9NSI6 2320 aa13.91□□□□□ -0.18
GTF3A-209ENST00000640289 NOTCH4Q99466 2003 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 C2orf78A6NCI8 922 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 SLC34A2O95436 690 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 ABL1P00519 1130 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 USP17L7P0C7H9 530 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 SKILP12757 684 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 LAMP2P13473 410 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 PDCLQ13371 301 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 TJAP1Q5JTD0 557 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 GPR158Q5T848 1215 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 OTOP3Q7RTS5 596 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 ZNF677Q86XU0 584 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms