RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 CCDC114Q96M63 670 aa16.46■□□□□ 0.23
CHRNA7-212ENST00000636271 LHX5Q9H2C1 402 aa16.46■□□□□ 0.23
CHRNA7-212ENST00000636271 SMYD3Q9H7B4 428 aa16.46■□□□□ 0.23
CHRNA7-212ENST00000636271 LRRC4CQ9HCJ2 640 aa16.46■□□□□ 0.23
CHRNA7-212ENST00000636271 RSPH14Q9UHP6 348 aa16.46■□□□□ 0.23
CHRNA7-212ENST00000636271 STRIP2Q9ULQ0 834 aa16.46■□□□□ 0.23
CHRNA7-212ENST00000636271 NOVA2Q9UNW9 492 aaKnown RBP16.46■□□□□ 0.23
CHRNA7-212ENST00000636271 STAU1O95793 577 aaKnown RBP16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 PAEPP09466 180 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 GRIK3Q13003 919 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 PIGHQ14442 188 aaPredicted RBP16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 ODF2Q5BJF6 829 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 LRRC38Q5VT99 294 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 DENND1BQ6P3S1 775 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 C16orf59Q7L2K0 433 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 ZNF280BQ86YH2 543 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 C7orf61Q8IZ16 206 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 RCOR2Q8IZ40 523 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 TMEM199Q8N511 208 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 C3orf58Q8NDZ4 430 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 ABHD8Q96I13 439 aa16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 RBM41Q96IZ5 413 aaKnown RBP16.46■□□□□ 0.22
CHRNA7-212ENST00000636271 SCN1AP35498 2009 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 PDCD11Q14690 1871 aaKnown RBP16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 TTC3P53804 2025 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 TP73O15350 636 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 DDHD2O94830 711 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 IVDP26440 423 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 RAD23BP54727 409 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 LILRA4P59901 499 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 PPP2R2AP63151 447 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 OGDHQ02218 1023 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 MYO1EQ12965 1108 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 NOMO2Q5JPE7 1267 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 CYP4A22Q5TCH4 519 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 ANKS1BQ7Z6G8 1248 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 TMCO2Q7Z6W1 182 aaPredicted RBP16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 NIPA2Q8N8Q9 360 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 BADQ92934 168 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 TBC1D13Q9NVG8 400 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 SLC12A6Q9UHW9 1150 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 SNX9Q9Y5X1 595 aa16.45■□□□□ 0.22
CHRNA7-212ENST00000636271 ALPK3Q96L96 1907 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 F8VP50 259 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 RIPK2O43353 540 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 UPP2O95045 317 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 TCF4P15884 667 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 MAGOHP61326 146 aaKnown RBP16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 UPP1Q16831 310 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 SKIDA1Q1XH10 827 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 ATP13A4Q4VNC1 1196 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 ZFYVE27Q5T4F4 411 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 RHBDF2Q6PJF5 856 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 FAM43BQ6ZT52 329 aaPredicted RBP16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 TLCD1Q96CP7 247 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 CASD1Q96PB1 797 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 SLITRK1Q96PX8 696 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 KLHL11Q9NVR0 708 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 HCSTQ9UBK5 93 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 LRFN2Q9ULH4 789 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 KPNA7A9QM74 516 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 F8W810 466 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 KRT1P04264 644 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 ATF2P15336 505 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 SYN1P17600 705 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 CAV1Q03135 178 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 TUSC3Q13454 348 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 PTPN20Q4JDL3 420 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 TRMT10CQ7L0Y3 403 aaKnown RBP16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 CROCCP2Q86T23 111 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 CCDC25Q86WR0 208 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 PGM2Q96G03 612 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 EPN3Q9H201 632 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 RABEP2Q9H5N1 569 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 NEU2Q9Y3R4 380 aa16.44■□□□□ 0.22
CHRNA7-212ENST00000636271 PI4K2BG5E9Z4 385 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 CILPO75339 1184 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 P4HA1P13674 534 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 CCT5P48643 541 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 TAF6P49848 677 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 COPS2P61201 443 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 DEFB103AP81534 67 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 DSC1Q08554 894 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 BYSLQ13895 437 aaKnown RBP16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 TRIP13Q15645 432 aaPredicted RBP16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 CD300LGQ6UXG3 332 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 ZNF365Q70YC5 407 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 SLC4A11Q8NBS3 891 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 FAM118BQ9BPY3 351 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 TMEM109Q9BVC6 243 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 TSPYL1Q9H0U9 437 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 CYP3A43Q9HB55 503 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 PRKAG2Q9UGJ0 569 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 HMGXB4Q9UGU5 601 aa16.43■□□□□ 0.22
CHRNA7-212ENST00000636271 ABHD14A-ACY1A0A1B0GW23 586 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 SIGLEC16A6NMB1 481 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 SRRM3A6NNA2 597 aaPredicted RBP16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 TJP3O95049 919 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 ITGB1P05556 798 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 ADCY8P40145 1251 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms