RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 FAM83CQ9BQN1 747 aa16.88■□□□□ 0.29
CHRNA4-211ENST00000628606 CHRDQ9H2X0 955 aa16.88■□□□□ 0.29
CHRNA4-211ENST00000628606 SEMA4AQ9H3S1 761 aa16.88■□□□□ 0.29
CHRNA4-211ENST00000628606 APOBEC3GQ9HC16 384 aaKnown RBP16.88■□□□□ 0.29
CHRNA4-211ENST00000628606 METTL14Q9HCE5 456 aaKnown RBP16.88■□□□□ 0.29
CHRNA4-211ENST00000628606 FAM49BQ9NUQ9 324 aa16.88■□□□□ 0.29
CHRNA4-211ENST00000628606 COMMD8Q9NX08 183 aa16.88■□□□□ 0.29
CHRNA4-211ENST00000628606 DUS2Q9NX74 493 aaKnown RBP16.88■□□□□ 0.29
CHRNA4-211ENST00000628606 COL4A2P08572 1712 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 TRIM49BA6NDI0 452 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 SHISA7A6NL88 538 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 FAM200BP0CF97 657 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 CCDC130P13994 396 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 ADORA2BP29275 332 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 PMS1P54277 932 aaKnown RBP16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 MCCD1P59942 119 aaPredicted RBP16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 UBE2HP62256 183 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 FZD5Q13467 585 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 PON2Q15165 354 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 ZNF528Q3MIS6 628 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 CCDC40Q4G0X9 1142 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 TRIM68Q6AZZ1 485 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 FUKQ8N0W3 1084 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 CPA6Q8N4T0 437 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 SH3RF2Q8TEC5 729 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 ATP2A3Q93084 1043 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 CEP63Q96MT8 703 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 FBXO44Q9H4M3 255 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 GCNT4Q9P109 453 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 HMGXB4Q9UGU5 601 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 ARHGAP26Q9UNA1 814 aa16.87■□□□□ 0.29
CHRNA4-211ENST00000628606 KIF26AQ9ULI4 1882 aaPredicted RBP16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 BIN1O00499 593 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 CHRNB1P11230 501 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 CCR3P51677 355 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 SLC5A3P53794 718 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 MAP3K7CLP57077 242 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 CETN1Q12798 172 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 MTAPQ13126 283 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 ZNF77Q15935 545 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 PAQR9Q6ZVX9 377 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 FILIP1Q7Z7B0 1213 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 DDX42Q86XP3 938 aaKnown RBP eCLIP16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 ZC3H3Q8IXZ2 948 aaKnown RBP16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 C12orf29Q8N999 325 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 OSCP1Q8WVF1 389 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 NELFBQ8WX92 580 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 ATRIPQ8WXE1 791 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 CYFIP2Q96F07 1278 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 HEXIM2Q96MH2 286 aaKnown RBP16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 TMEM30AQ9NV96 361 aa16.86■□□□□ 0.29
CHRNA4-211ENST00000628606 VPS13AQ96RL7 3174 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 PTPRZ1P23471 2315 aaPredicted RBP16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 PATJQ8NI35 1801 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 CILPO75339 1184 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 MBL2P11226 248 aaPredicted RBP16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 ARSAP15289 507 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 TCF3P15923 654 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 NRLP54845 237 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 YWHAEP62258 255 aaKnown RBP16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 SLC7A9P82251 487 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 GRSF1Q12849 480 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 USP4Q13107 963 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 MORC3Q14149 939 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 ZNF394Q53GI3 561 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 HECTD3Q5T447 861 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 TXNDC11Q6PKC3 985 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 ZNF687Q8N1G0 1237 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 SYNPOQ8N3V7 929 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 SCAMP5Q8TAC9 235 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 SEMA4DQ92854 862 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 HNRNPABQ99729 332 aaKnown RBP16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 SMOQ99835 787 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 NACA2Q9H009 215 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 FAM124BQ9H5Z6 455 aaPredicted RBP16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 HPS4Q9NQG7 708 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 CHORDC1Q9UHD1 332 aaPredicted RBP16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 R4GN57 208 aa16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 RIF1Q5UIP0 2472 aaKnown RBP16.85■□□□□ 0.29
CHRNA4-211ENST00000628606 PRR23AA6NEV1 266 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 LEFTY2O00292 366 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 SLC9A3R1O14745 358 aaPredicted RBP16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 TNFRSF10BO14763 440 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 NFATC1O95644 943 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 LMNAP02545 664 aaKnown RBP16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 CD44P16070 742 aaKnown RBP16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 MAMSTRQ6ZN01 415 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 MAML2Q8IZL2 1156 aaPredicted RBP16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 SPEM1Q8N4L4 309 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 TWNKQ96RR1 684 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 FAM126AQ9BYI3 521 aaPredicted RBP16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 RNF38Q9H0F5 515 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 ECT2Q9H8V3 914 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 CSNK1G1Q9HCP0 422 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 CISHQ9NSE2 258 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 CTNND2Q9UQB3 1225 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 CPQQ9Y646 472 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 WNT6Q9Y6F9 365 aa16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 HELZP42694 1942 aaKnown RBP16.84■□□□□ 0.29
CHRNA4-211ENST00000628606 FGFR1OPO95684 399 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1328.6 ms