RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 FOXJ1Q92949 421 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 MED8Q96G25 268 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 TRMT2BQ96GJ1 504 aaKnown RBP7.41□□□□□ -1.22
MUC1-227ENST00000615517 MS4A3Q96HJ5 214 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 MYRFLQ96LU7 910 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 ACOX2Q99424 681 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 MRPL4Q9BYD3 311 aaKnown RBP7.41□□□□□ -1.22
MUC1-227ENST00000615517 HAPLN2Q9GZV7 340 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 MIR1-1HGQ9H1L0 117 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 TTC12Q9H892 705 aaPredicted RBP7.41□□□□□ -1.22
MUC1-227ENST00000615517 ANO2Q9NQ90 1003 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 GJB4Q9NTQ9 266 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 ARHGAP26Q9UNA1 814 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 PHLPP2Q6ZVD8 1323 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 ITPR3Q14573 2671 aa7.41□□□□□ -1.22
MUC1-227ENST00000615517 DOCK9Q9BZ29 2069 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 TTC26A0AVF1 554 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 MEI4A8MW99 385 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 CBX4O00257 560 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 KCNK3O14649 394 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 TERTO14746 1132 aaKnown RBP7.4□□□□□ -1.22
MUC1-227ENST00000615517 TRIM24O15164 1050 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 BCAT2O15382 392 aaPredicted RBP7.4□□□□□ -1.22
MUC1-227ENST00000615517 PRPF40AO75400 957 aaKnown RBP7.4□□□□□ -1.22
MUC1-227ENST00000615517 DEXIO95424 95 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 NCAM1P13591 858 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 HDCP19113 662 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 PDIA3P30101 505 aaKnown RBP7.4□□□□□ -1.22
MUC1-227ENST00000615517 TNFSF9P41273 254 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 TXKP42681 527 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 CLCN6P51797 869 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 SSRP1Q08945 709 aaKnown RBP7.4□□□□□ -1.22
MUC1-227ENST00000615517 KIF19Q2TAC6 998 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 RNF20Q5VTR2 975 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 DCAF12L1Q5VU92 463 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 EGFLAMQ63HQ2 1017 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 IL27RAQ6UWB1 636 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 IPO4Q8TEX9 1081 aaKnown RBP7.4□□□□□ -1.22
MUC1-227ENST00000615517 FAM212AQ96EL1 285 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 TOE1Q96GM8 510 aaKnown RBP7.4□□□□□ -1.22
MUC1-227ENST00000615517 NAF1Q96HR8 494 aaKnown RBP7.4□□□□□ -1.22
MUC1-227ENST00000615517 MRGPRX1Q96LB2 322 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 IFT74Q96LB3 600 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 TCHPQ9BT92 498 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 AGXT2Q9BYV1 514 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 TMEM134Q9H6X4 195 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 KCNK4Q9NYG8 393 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 WSB2Q9NYS7 404 aaPredicted RBP7.4□□□□□ -1.22
MUC1-227ENST00000615517 ARHGAP28Q9P2N2 729 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 UBQLN1Q9UMX0 589 aaKnown RBP7.4□□□□□ -1.22
MUC1-227ENST00000615517 NFE2L3Q9Y4A8 694 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 SNX11Q9Y5W9 270 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 RAD54BQ9Y620 910 aa7.4□□□□□ -1.22
MUC1-227ENST00000615517 CENPEQ02224 2701 aa7.4□□□□□ -1.23
MUC1-227ENST00000615517 TDRD6O60522 2096 aaKnown RBP7.39□□□□□ -1.23
MUC1-227ENST00000615517 ARHGEF35A5YM69 484 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 TBC1D3BA6NDS4 549 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 CCDC169A6NNP5 214 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 LACTBL1A8MY62 500 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 KCNJ18B7U540 433 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 PIRO00625 290 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 ADH5P11766 374 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 GP1BBP13224 206 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 CYP2F1P24903 491 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 CD6P30203 668 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 NTSR1P30989 418 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 HNF1BP35680 557 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 GRK6P43250 576 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 NPTX2P47972 431 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 CSNK1EP49674 416 aaKnown RBP7.39□□□□□ -1.23
MUC1-227ENST00000615517 PEX3P56589 373 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 TMPRSS3P57727 454 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 SMARCB1Q12824 385 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 DNAJC3Q13217 504 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 KCNB1Q14721 858 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 NOLC1Q14978 699 aaKnown RBP eCLIP7.39□□□□□ -1.23
MUC1-227ENST00000615517 SUZ12Q15022 739 aaKnown RBP7.39□□□□□ -1.23
MUC1-227ENST00000615517 SF3A1Q15459 793 aaKnown RBP7.39□□□□□ -1.23
MUC1-227ENST00000615517 CALCRLQ16602 461 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 TBC1D25Q3MII6 688 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 HES3Q5TGS1 186 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 FBXL19Q6PCT2 694 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 ETFBKMTQ8IXQ9 262 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 TRIM22Q8IYM9 498 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 DAW1Q8N136 415 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 FBXL16Q8N461 479 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 NAT16Q8N8M0 369 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 KCNV2Q8TDN2 545 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 TSC1Q92574 1164 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 MTMR9Q96QG7 549 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 NAP1L4Q99733 375 aaKnown RBP7.39□□□□□ -1.23
MUC1-227ENST00000615517 GPR174Q9BXC1 333 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 RNF38Q9H0F5 515 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 PLEKHA5Q9HAU0 1116 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 TUFT1Q9NNX1 390 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 UXTQ9UBK9 157 aaPredicted RBP7.39□□□□□ -1.23
MUC1-227ENST00000615517 EIF2B4Q9UI10 523 aaKnown RBP7.39□□□□□ -1.23
MUC1-227ENST00000615517 PCDHB5Q9Y5E4 795 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 PCDHGA1Q9Y5H4 931 aa7.39□□□□□ -1.23
MUC1-227ENST00000615517 METTL12A8MUP2 240 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms